ggKbase home page

13_1_20cm_3_scaffold_1205

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1205_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
YD repeat protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q668_CATAD
Uncharacterized protein {ECO:0000313|EMBL:AHH98643.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
13_1_20cm_3_scaffold_1205_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1941..2894)
DNA (954bp) protein (318aa)
Ribonuclease BN n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6R9_CATAD rbh
Ribonuclease BN {ECO:0000313|EMBL:ACU74104.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928
ribonuclease BN rbh
13_1_20cm_3_scaffold_1205_3
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2990..3961)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037D1EC7 rbh
ABC transporter glycine betaine/choline-binding protein {ECO:0000313|EMBL:EWM15925.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzn
hypothetical protein
13_1_20cm_3_scaffold_1205_4
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4019..4789)
DNA (771bp) protein (257aa)
ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6B2F2
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCH80030.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;"
binding-protein-dependent transporters inner membrane component
13_1_20cm_3_scaffold_1205_5
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4786..5373)
DNA (588bp) protein (196aa)
ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5DF79
ABC transporter permease {ECO:0000313|EMBL:KGH47459.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
binding-protein-dependent transporters inner membrane component
13_1_20cm_3_scaffold_1205_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5370..6527)
DNA (1158bp) protein (386aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3J2_FRASU rbh
ABC transporter related protein {ECO:0000313|EMBL:ADP78194.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
glycine/betaine ABC transporter ATPase rbh
13_1_20cm_3_scaffold_1205_7
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6524..7285)
DNA (762bp) protein (254aa)
transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B72AB4
Urocanate hydratase {ECO:0000313|EMBL:CCH80033.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
transcriptional regulator
13_1_20cm_3_scaffold_1205_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7748..8839
DNA (1092bp) protein (364aa)
histidine ammonia-lyase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5C088 rbh
Histidine ammonia-lyase {ECO:0000313|EMBL:EXG81080.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
histidine ammonia-lyase
13_1_20cm_3_scaffold_1205_9
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9819..13085)
DNA (3267bp) protein (1089aa)
Large ATP-binding protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0FMD1_AMYMS rbh
Putative large ATP-binding protein {ECO:0000313|EMBL:CEL16984.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium
large ATP-binding protein rbh
13_1_20cm_3_scaffold_1205_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13737..14336
DNA (600bp) protein (200aa)
Transcriptional regulator, SARP family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8X8_GEOOG
Transcriptional regulator, SARP family {ECO:0000313|EMBL:ADB73621.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophi
SARP family transcriptional regulator
13_1_20cm_3_scaffold_1205_11
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14380..16758
DNA (2379bp) protein (793aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037AAFDC
SARP family transcriptional regulator {ECO:0000313|EMBL:EOD67637.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vanc
SARP family transcriptional regulator
13_1_20cm_3_scaffold_1205_12
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16761..17255
DNA (495bp) protein (165aa)
Putative phenylacetic acid degradation protein PaaI n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0Y1_KITSK
Aromatic compound degradation protein PaaI {ECO:0000313|EMBL:KJY37033.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp.
paaI; putative phenylacetic acid degradation protein PaaI
13_1_20cm_3_scaffold_1205_13
Saccharothrix mutabilis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17152..18516)
DNA (1365bp) protein (455aa)
Lysine 2,3-aminomutase (EC:5.4.3.2)
CmnP n=1 Tax=Streptomyces capreolus RepID=A6YEI7_STRCP
CmnP {ECO:0000313|EMBL:ABR67759.1}; TaxID=66854 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix mutabilis subsp. capreolus (Streptomyce
13_1_20cm_3_scaffold_1205_14
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18516..20228)
DNA (1713bp) protein (571aa)
Putative acyl-CoA synthetase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0Y9_KITSK rbh
Uncharacterized protein {ECO:0000313|EMBL:KJY37031.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
putative acyl-CoA synthetase
13_1_20cm_3_scaffold_1205_15
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20239..21570)
DNA (1332bp) protein (444aa)
Putative amine oxidase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0Z0_KITSK
Amine oxidase {ECO:0000313|EMBL:KJY37015.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
putative amine oxidase
13_1_20cm_3_scaffold_1205_16
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21567..21791)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0Z1_KITSK
Phosphopantetheine-containing protein {ECO:0000313|EMBL:KJY37014.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL
hypothetical protein
13_1_20cm_3_scaffold_1205_17
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21795..23108)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0Z2_KITSK
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ64904.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
hypothetical protein
13_1_20cm_3_scaffold_1205_18
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23096..23947)
DNA (852bp) protein (284aa)
short-chain dehydrogenase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036AB275
Short-chain dehydrogenase {ECO:0000313|EMBL:KJY37019.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
short-chain dehydrogenase
13_1_20cm_3_scaffold_1205_19
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23944..25272)
DNA (1329bp) protein (443aa)
Putative major facilitator superfamily transporter n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N0Y5_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KJY37018.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
putative major facilitator superfamily transporter
13_1_20cm_3_scaffold_1205_20
unknown

Not on your lists

comp(25269..25430)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 20 items

View Taxonomy