ggKbase home page

13_1_20cm_3_scaffold_2008

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2008_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1370)
DNA (1368bp) protein (456aa)
NLP/P60 protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZC9_CATAD rbh
NLP/P60 protein {ECO:0000313|EMBL:ACU71586.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
NLP/P60 protein rbh
13_1_20cm_3_scaffold_2008_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1606..1953
DNA (348bp) protein (116aa)
YCII-related protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QI46_CATAD
YCII-related protein {ECO:0000313|EMBL:ACU73091.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 4
hypothetical protein
13_1_20cm_3_scaffold_2008_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2005..3252
DNA (1248bp) protein (416aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QI45_CATAD rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU73090.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Ca
ECF subfamily RNA polymerase sigma-24 subunit rbh
13_1_20cm_3_scaffold_2008_4
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3275..3982)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THW3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN32071.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
13_1_20cm_3_scaffold_2008_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3979..4893)
DNA (915bp) protein (305aa)
ABC transporter n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B66673 rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EXG80120.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Crypto
ABC transporter
13_1_20cm_3_scaffold_2008_6
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5026..5688)
DNA (663bp) protein (221aa)
LuxR family transcriptional regulator n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MG12_9ACTO
Kitasatospora griseola strain MF730-N6 RKJC_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ67164.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
two component system response regulator
13_1_20cm_3_scaffold_2008_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5685..6857)
DNA (1173bp) protein (391aa)
Putative two-component system sensor kinase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6D5_CATAD
Putative two-component system sensor kinase {ECO:0000313|EMBL:ACU72141.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora a
two-component system sensor kinase
13_1_20cm_3_scaffold_2008_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6964..8040)
DNA (1077bp) protein (359aa)
Alpha/beta hydrolase fold protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q740_CATAD rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACU76053.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
alpha/beta hydrolase fold protein rbh
13_1_20cm_3_scaffold_2008_9
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8265..9251)
DNA (987bp) protein (329aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=443255
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=2 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=D5SJA2_STRC2 rbh
13_1_20cm_3_scaffold_2008_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9654..10652
DNA (999bp) protein (333aa)
Cellulose-binding family II n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJR4_CATAD rbh
Cellulose-binding family II {ECO:0000313|EMBL:ACU73152.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispor
cellulose-binding family II protein rbh
13_1_20cm_3_scaffold_2008_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10613..10882
DNA (270bp) protein (90aa)
Cellulose-binding family II n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJR4_CATAD
Cellulose-binding family II {ECO:0000313|EMBL:ACU73152.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispor
cellulose-binding family II protein
13_1_20cm_3_scaffold_2008_12
unknown

Not on your lists

comp(11366..11536)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_3_scaffold_2008_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11635..12039
DNA (405bp) protein (135aa)
Luciferase-like monooxygenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q1I3_CATAD
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACU73712.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
luciferase-like monooxygenase
13_1_20cm_3_scaffold_2008_14
unknown

Not on your lists

12150..12602
DNA (453bp) protein (151aa)

This feature has no annotations

Displaying 14 items

View Taxonomy