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13_1_20cm_3_scaffold_2725

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2725_1
unknown

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2..115
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_3_scaffold_2725_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(204..965)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVP3_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU71285.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_2725_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1283..4168)
DNA (2886bp) protein (962aa)
Aspartate--tRNA ligase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVP2_CATAD rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACU71284.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain D
aspS; aspartyl-tRNA synthetase rbh
13_1_20cm_3_scaffold_2725_4
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4449..5039
DNA (591bp) protein (197aa)
Putative hydrolase n=1 Tax=Streptomyces sp. Tu6071 RepID=F3Z8Q6_9ACTO
Putative hydrolase {ECO:0000313|EMBL:EGJ78633.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
13_1_20cm_3_scaffold_2725_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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5036..5860
DNA (825bp) protein (275aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVN9_CATAD rbh
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:ACU71281.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenu
cyclophilin type peptidyl-prolyl cis-trans isomerase rbh
13_1_20cm_3_scaffold_2725_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6015..7259
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVN8_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU71280.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_2725_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7665..7964
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVN7_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU71279.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
hypothetical protein
13_1_20cm_3_scaffold_2725_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8008..10785)
DNA (2778bp) protein (926aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACU71277.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ACU71277.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenuli
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5) rbh
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PVN5_CATAD rbh
13_1_20cm_3_scaffold_2725_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10861..11424)
DNA (564bp) protein (188aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJQ3_CATAD
13_1_20cm_3_scaffold_2725_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11447..14329)
DNA (2883bp) protein (961aa)
Protein translocase subunit SecD n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJQ1_CATAD rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphi
protein-export membrane protein SecD rbh
13_1_20cm_3_scaffold_2725_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14539..15009)
DNA (471bp) protein (157aa)
Preprotein translocase, YajC subunit n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJQ0_CATAD
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ACU71273.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphi
preprotein translocase subunit YajC
13_1_20cm_3_scaffold_2725_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15315..16328)
DNA (1014bp) protein (338aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; C
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJP9_CATAD rbh
Holliday junction DNA helicase RuvB rbh
13_1_20cm_3_scaffold_2725_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16442..17068)
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJP8_CATAD rbh
ruvA; Holliday junction DNA helicase RuvA rbh
13_1_20cm_3_scaffold_2725_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17065..17628)
DNA (564bp) protein (188aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJP7_CATAD
13_1_20cm_3_scaffold_2725_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17836..18225)
DNA (390bp) protein (130aa)
endoribonuclease L-PSP n=1 Tax=Rhizobium leguminosarum RepID=UPI000369ABD8
endoribonuclease L-PSP Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
endoribonuclease L-PSP protein
13_1_20cm_3_scaffold_2725_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18307..19062)
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein Caci_2351 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJP6_CATAD rbh
Probable transcriptional regulatory protein Caci_2351 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="C
hypothetical protein rbh
13_1_20cm_3_scaffold_2725_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19102..19719)
DNA (618bp) protein (206aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJP5_CATAD rbh
SNO glutamine amidotransferase rbh
13_1_20cm_3_scaffold_2725_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19709..20518)
DNA (810bp) protein (270aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJP4_CATAD
pyridoxal biosynthesis lyase PdxS
Displaying 18 items

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