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13_1_20cm_3_scaffold_552_3

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(1931..2140)

Top 3 Functional Annotations

Value Algorithm Source
sigH; RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 63.0
  • Bit_score: 74
  • Evalue 1.00e-11
RNA polymerase sigma-H factor (Sigma-30) n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KGF0_BACHD similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 63.0
  • Bit_score: 74
  • Evalue 3.70e-11
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 71.0
  • Bit_score: 102
  • Evalue 3.00e-19

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCCGCACGGCCCGCCGCAACAGCCGCGCAGAAGGCCCAACGAGAGCTCGAAGACCTGCAGCTCGTGCTCCGCGCGCGCAACGGGGACGGCGCTGCGCTCGACGTCCTCATCCGCCGTTACACGGGTTTCGTGCGGTTGAAGGCGAGCTCGTACTTCCTCGCAGGTGGAGACTCGGAAGACCTCGTCCAGGAGGGCCTGATTGCGTGA
PROTEIN sequence
Length: 70
MAARPAATAAQKAQRELEDLQLVLRARNGDGAALDVLIRRYTGFVRLKASSYFLAGGDSEDLVQEGLIA*