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13_1_20cm_3_scaffold_552

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_552_trna_1
unknown

Not on your lists

comp(47..119)
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_552_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(405..1469)
DNA (1065bp) protein (355aa)
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
RpoD subfamily RNA polymerase sigma-70 subunit
13_1_20cm_3_scaffold_552_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1551..1934)
DNA (384bp) protein (128aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_552_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1931..2140)
DNA (210bp) protein (70aa)
sigH; RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-H factor (Sigma-30) n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KGF0_BACHD
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_552_4
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2311..2757)
DNA (447bp) protein (149aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FCX1_DESAA
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACL06402.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfati
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_552_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2754..3629)
DNA (876bp) protein (292aa)
Aminoglycoside phosphotransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYB9_STRRD
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACZ87129.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangi
aminoglycoside phosphotransferase
13_1_20cm_3_scaffold_552_6
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3655..4215)
DNA (561bp) protein (187aa)
NADPH-dependent FMN reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFG9_CONWI
Putative NADPH-dependent oxidoreductase {ECO:0000313|EMBL:GAF47090.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislavien
NADPH-dependent FMN reductase
13_1_20cm_3_scaffold_552_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4221..4757)
DNA (537bp) protein (179aa)
hypothetical protein, partial n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B41E24
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_552_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4818..5294
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWG7_FRADG
MarR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
MarR family transcriptional regulator
13_1_20cm_3_scaffold_552_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5291..5722)
DNA (432bp) protein (144aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_552_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5810..6520)
DNA (711bp) protein (237aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RBG_16_Actinobacteria_68_12_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F143_CONWI
TrmH family RNA methyltransferase
13_1_20cm_3_scaffold_552_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6517..7776)
DNA (1260bp) protein (420aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Actinobacteria_67_10_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1D3_9ACTN
13_1_20cm_3_scaffold_552_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7763..8743)
DNA (981bp) protein (327aa)
Glutamate--tRNA ligase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BRM5_PUNMI
glutamyl-tRNA synthetase Tax=RBG_16_Actinobacteria_67_10_curated
Glutamyl- and glutaminyl-tRNA synthetase
13_1_20cm_3_scaffold_552_13
unknown

Not on your lists

comp(8823..9194)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_3_scaffold_552_14
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

comp(9216..10574)
DNA (1359bp) protein (453aa)
Uncharacterized transmembrane protein DDB_G0289901 n=1 Tax=Dictyostelium discoideum RepID=Y8625_DICDI
Uncharacterized transmembrane protein DDB_G0289901; Flags: Precursor;; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mo
hypothetical protein
13_1_20cm_3_scaffold_552_15
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10663..12975)
DNA (2313bp) protein (771aa)
Streptococcal hemagglutinin n=2 Tax=Streptococcus sanguinis RepID=F9E196_STRSA
Streptococcal hemagglutinin {ECO:0000313|EMBL:EGQ20389.1}; TaxID=997356 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis ATCC
baaA2; trimeric autotransporter adhesin
Displaying 16 items

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