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13_1_20cm_3_scaffold_8450_7

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(6287..7171)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BZJ3_STRBB similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 291.0
  • Bit_score: 439
  • Evalue 2.40e-120
  • rbh
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:ADI09898.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingc UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 291.0
  • Bit_score: 439
  • Evalue 3.40e-120
sig42; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 291.0
  • Bit_score: 439
  • Evalue 6.80e-121

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Taxonomy

Streptomyces bingchenggensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGACCGTCACCGAGACCGCCACCGACACCTTCGTCGCCCATCGCAATCTGCTGTTCACGGTCGCCTACGAGATGCTCGGCTCGGCCGCCGACGCCGAGGACGTGCTGCAGGAGACCTGGCTGCGCTGGACCAGGGTCGACCTGGACAGCGTGCGGGACCGCCGTGCGTACCTGGTCCGGATCGCCACCCGCCAGGCGCTGACCCACATGCGCACGCTCGGGCGGCGCAAGGAGACCTACATCGGACCCTGGCTCCCCGAGCCGCTGCTCACCGCGCCGGACGTGGCCGAGGACGTGGAACTGGCCGACAGCGTCTCGATGGCGATGCTGCTGGTGATGGAGACGCTGACGCCGACCGAGCGCGCGGTGTTCGTGCTGCGCGAGGTGTTCGACCTCGACTACGGCGAGATCGCCGAGGCGGTCGACAAGACTCCGGCGGCGGTGCGGCAGATCGCGCACCGGGCCCGCAACCACGTCGCCGCTCGCCGGCCGCGCGGTATCGCGTCGGCCGCCGAGACCCGGGAAGCGCTCGCGGCGTTCCAGCGCGCGATCGAGACCGGGGACCTGCAGGGGCTGCTCGACATGCTCGCGCCGGACGTGGTCGCGCTGGGCGACGGCGGCGGTGTCCGGCAGGCGTTCCTGGAGCCGATCGTCGGGGCCGGGGCTCTGGGTACGGCGCTGTCGCAGGGGTTGCCCCAGCTCAGGGGCAGGGTGGCGTTCGAGCCCGCGCAGATCAACGGCGCCCCGGCCCTGCTCGTCCACTCCGACGGCGAGGTCAGTGTGATCGCCATGCACGTGCAGGACGGGCTCATCTCCGGGCTCTACATCGTCCGCAACCCGGAGAAGCTGTCGCATGTGGGGCAGGAGACGCCGATGAGCCGCTGA
PROTEIN sequence
Length: 295
MTVTETATDTFVAHRNLLFTVAYEMLGSAADAEDVLQETWLRWTRVDLDSVRDRRAYLVRIATRQALTHMRTLGRRKETYIGPWLPEPLLTAPDVAEDVELADSVSMAMLLVMETLTPTERAVFVLREVFDLDYGEIAEAVDKTPAAVRQIAHRARNHVAARRPRGIASAAETREALAAFQRAIETGDLQGLLDMLAPDVVALGDGGGVRQAFLEPIVGAGALGTALSQGLPQLRGRVAFEPAQINGAPALLVHSDGEVSVIAMHVQDGLISGLYIVRNPEKLSHVGQETPMSR*