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13_1_20cm_3_scaffold_8450

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_8450_1
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..131)
DNA (129bp) protein (43aa)
Hydratase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N7V2_9ACTO
Putative amidohydrolase {ECO:0000313|EMBL:KID28484.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
13_1_20cm_3_scaffold_8450_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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264..1289
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N8S3_9ACTO rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AIJ24843.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis meth
lacI; LacI family transcriptional regulator rbh
13_1_20cm_3_scaffold_8450_3
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1307..2014)
DNA (708bp) protein (236aa)
short-chain dehydrogenase n=1 Tax=Streptomyces prunicolor RepID=UPI00037DA6A1 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF79285.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
short-chain dehydrogenase rbh
13_1_20cm_3_scaffold_8450_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2130..2936
DNA (807bp) protein (269aa)
Helix-turn-helix domain-containing protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXZ3_9ACTO rbh
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AGZ41868.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes f
helix-turn-helix domain-containing protein rbh
13_1_20cm_3_scaffold_8450_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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3052..4977
DNA (1926bp) protein (642aa)
Fibronectin type III domain-containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q0N5_CATAD rbh
Fibronectin type III domain-containing protein {ECO:0000313|EMBL:ACU69663.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispor
fibronectin type III domain-containing protein rbh
13_1_20cm_3_scaffold_8450_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5232..6185
DNA (954bp) protein (318aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PXX4_CATAD rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACU73434.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
alcohol dehydrogenase GroES domain-containing protein rbh
13_1_20cm_3_scaffold_8450_7
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6287..7171)
DNA (885bp) protein (295aa)
ECF subfamily RNA polymerase sigma factor n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BZJ3_STRBB rbh
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:ADI09898.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingc
sig42; ECF subfamily RNA polymerase sigma factor
13_1_20cm_3_scaffold_8450_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7280..8506)
DNA (1227bp) protein (409aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3T0_CATAD rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU77688.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Ca
ECF subfamily RNA polymerase sigma-24 subunit rbh
13_1_20cm_3_scaffold_8450_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8524..8880)
DNA (357bp) protein (119aa)
YCII-related protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3T1_CATAD
YCII-related protein {ECO:0000313|EMBL:ACU77689.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 4
hypothetical protein
13_1_20cm_3_scaffold_8450_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9068..9988
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3T3_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU77691.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_8450_11
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10095..10325)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M7A3S6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EMP11217.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
13_1_20cm_3_scaffold_8450_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10496..11191)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3T6_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU77694.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_8450_13
unknown

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11515..11652
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_3_scaffold_8450_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11735..12172
DNA (438bp) protein (146aa)
Transcriptional regulator, GntR family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3T9_CATAD
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU77697.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
GntR family transcriptional regulator
13_1_20cm_3_scaffold_8450_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12608..12934
DNA (327bp) protein (109aa)
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3U0_CATAD
ABC transporter related {ECO:0000313|EMBL:ACU77698.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
ABC transporter
13_1_20cm_3_scaffold_8450_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12931..13476
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3U1_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU77699.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
hypothetical protein
Displaying 16 items

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