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13_1_20cm_4_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_355_1
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(10..1485)
DNA (1476bp) protein (492aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Glutamine synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBY2_THET1
glutamine synthetase, type I
13_1_20cm_4_scaffold_355_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1765..1914)
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_355_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2010..2711
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_1_20cm_4_scaffold_355_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2656..3570
DNA (915bp) protein (305aa)
Putative periplasmic solute-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DMZ9_SINAD
periplasmic solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF178
13_1_20cm_4_scaffold_355_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3639..4715
DNA (1077bp) protein (359aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_1_20cm_4_scaffold_355_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4768..5652
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase id=2099795 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
oxidoreductase
13_1_20cm_4_scaffold_355_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5865..6293)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_355_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6589..7758
DNA (1170bp) protein (390aa)
Transcriptional regulator, SARP family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATJ1_STRRD
SARP family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_355_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7862..8272
DNA (411bp) protein (137aa)
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Sensor histidine kinase/response regulator id=2233818 bin=GWB2_Proteobacteria_55_19 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_355_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8269..8913
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_355_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8943..9527
DNA (585bp) protein (195aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
13_1_20cm_4_scaffold_355_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9524..10540
DNA (1017bp) protein (339aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protease HtpX homolog id=2725088 bin=GWC2_Ignavibacteria_56_12 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
HtpX-2 peptidase
13_1_20cm_4_scaffold_355_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10537..11919
DNA (1383bp) protein (461aa)
acyltransferase; K00631 glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycerol-3-phosphate O-acyltransferase id=3398992 bin=GWC2_Proteo_65_14_Ab886 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Acyltransferase family protein associated with ethylmalonyl-CoA pathway
13_1_20cm_4_scaffold_355_14
unknown

Not on your lists

comp(11922..12152)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_355_15
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12273..12662
DNA (390bp) protein (130aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Protein archease id=4628521 bin=GWA2_Deltaproteo_65_63 species=Salinispora arenicola genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_355_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12667..14100
DNA (1434bp) protein (478aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA-splicing ligase RtcB n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L0_PELCD rbh
hypothetical protein
13_1_20cm_4_scaffold_355_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14106..15047)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0M0_ROSS1
hypothetical protein; K07027 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_4_scaffold_355_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15047..15748)
DNA (702bp) protein (234aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJW8_ANASK
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDM64129.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
polysaccharide deacetylase
13_1_20cm_4_scaffold_355_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16326..16979)
DNA (654bp) protein (218aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_355_20
unknown

Not on your lists

16997..17545
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_4_scaffold_355_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17551..19527)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_355_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19537..21546)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_355_23
unknown

Not on your lists

22294..22644
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_20cm_4_scaffold_355_24
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22656..23615)
DNA (960bp) protein (320aa)
Thiamine-phosphate pyrophosphorylase protein {ECO:0000313|EMBL:ERJ05693.1}; EC=2.5.1.3 {ECO:0000313|EMBL:ERJ05693.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Thiamine-phosphate pyrophosphorylase protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DZZ8_9EURY
ADP-ribosylglycohydrolase
13_1_20cm_4_scaffold_355_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23612..25264)
DNA (1653bp) protein (551aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE65_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG93844.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
13_1_20cm_4_scaffold_355_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25395..26252
DNA (858bp) protein (286aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SBJ0_9CYAN
alpha/beta hydrolase fold protein; K06889 Tax=GWC2_Gemmatimonadetes_71_10_curated
alpha/beta fold family hydrolase
13_1_20cm_4_scaffold_355_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26249..27091)
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_355_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27248..28345
DNA (1098bp) protein (366aa)
Putative branched-chain amino acid-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N5_GEMAT
Putative branched-chain amino acid-binding protein {ECO:0000313|EMBL:BAH37545.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmati
putative branched-chain amino acid-binding protein
13_1_20cm_4_scaffold_355_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28345..30039
DNA (1695bp) protein (565aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_4_scaffold_355_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30069..30389)
DNA (321bp) protein (107aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 38 in total

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