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13_1_20cm_4_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_372_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2..745
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L49_SYMTH
Uncharacterized protein {ECO:0000313|EMBL:CDM64633.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_4_scaffold_372_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

742..1377
DNA (636bp) protein (212aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88544.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_4_scaffold_372_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1390..2181
DNA (792bp) protein (264aa)
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PhzF family phenazine biosynthesis protein
13_1_20cm_4_scaffold_372_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2229..3164
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ85_TRURR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_372_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3164..5113
DNA (1950bp) protein (650aa)
Peptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIK6_RHOMR
Peptidase {ECO:0000313|EMBL:AEN72339.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
peptidase
13_1_20cm_4_scaffold_372_6
unknown

Not on your lists

comp(5151..5534)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_4_scaffold_372_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5549..7594)
DNA (2046bp) protein (682aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=GWA2_Ignavibacteria_54_16_curated
dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=24432021 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9, prolyl oligopeptidase active site region
13_1_20cm_4_scaffold_372_8
unknown

Not on your lists

comp(7644..7913)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_4_scaffold_372_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7983..8978
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJV3_ANASK
13_1_20cm_4_scaffold_372_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8982..9608)
DNA (627bp) protein (209aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_372_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9605..11044)
DNA (1440bp) protein (480aa)
Peptidase M16 domain protein {ECO:0000313|EMBL:AHG88464.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M16 domain protein
putative M16B family peptidase id=12557712 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_20cm_4_scaffold_372_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11041..12423)
DNA (1383bp) protein (461aa)
peptidase M16-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase M16-like protein id=3800449 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
peptidase M16-like protein
13_1_20cm_4_scaffold_372_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12598..12858
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAI9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_372_14
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(12855..13784)
DNA (930bp) protein (310aa)
metal dependent phosphohydrolase Tax=RBG_16_Zixibacteria_43_9_curated
metal dependent phosphohydrolase id=24519186 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
HD domain-containing protein
13_1_20cm_4_scaffold_372_15
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(13859..14164)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBS7_CONWI
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_20cm_4_scaffold_372_16
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14216..14986
DNA (771bp) protein (257aa)
Regulatory components of sensory transduction system n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP74_9PROT
Two-component response regulator {ECO:0000313|EMBL:KIV73941.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
transcriptional regulatory protein ompR
13_1_20cm_4_scaffold_372_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15075..15761
DNA (687bp) protein (229aa)
Cellulose synthase 1 operon protein C n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHQ0_SORC5
Cellulose synthase 1 operon protein C {ECO:0000313|EMBL:CAN99528.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source
cellulose synthase 1 operon protein C
13_1_20cm_4_scaffold_372_18
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15751..16107
DNA (357bp) protein (119aa)
Transcriptional regulatory, C terminal family protein n=3 Tax=Burkholderia thailandensis RepID=N0APD4_BURTH
Uncharacterized protein {ECO:0000313|EMBL:AJY38589.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
hypothetical protein
13_1_20cm_4_scaffold_372_19
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

16104..17165
DNA (1062bp) protein (354aa)
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein id=24428421 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PBS lyase HEAT domain-containing protein repeat-containing protein
13_1_20cm_4_scaffold_372_20
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17162..18589
DNA (1428bp) protein (476aa)
Glycosyl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP36_BLASD
Glycosyl transferase {ECO:0000313|EMBL:CCG02697.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain D
glycosyl transferase
13_1_20cm_4_scaffold_372_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18655..19902)
DNA (1248bp) protein (416aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative dipeptidase (EC:3.4.13.-)
Renal dipeptidase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ63_BREDI
13_1_20cm_4_scaffold_372_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19971..20492
DNA (522bp) protein (174aa)
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B6_9CHLR
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_20cm_4_scaffold_372_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20479..22980
DNA (2502bp) protein (834aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs id=1247861 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_20cm_4_scaffold_372_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22980..23990
DNA (1011bp) protein (337aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_20cm_4_scaffold_372_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23998..24540)
DNA (543bp) protein (181aa)
Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM9_RUBXD
PadR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional regulator PadR family protein
13_1_20cm_4_scaffold_372_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24741..25415
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFL2_SORC5
Uncharacterized protein {ECO:0000313|EMBL:CAN95003.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
hypothetical protein
13_1_20cm_4_scaffold_372_27
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

25412..27331
DNA (1920bp) protein (640aa)
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:ABQ91390.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABQ91390.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chlo
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
13_1_20cm_4_scaffold_372_28
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(27345..28700)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003623659
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_20cm_4_scaffold_372_29
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(28700..29239)
DNA (540bp) protein (180aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQC2_PSEUU
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_68_9_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_372_30
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

29385..30506
DNA (1122bp) protein (374aa)
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein id=14428743 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Displaying items 1-30 of 32 in total

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