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13_1_20cm_4_scaffold_425

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_425_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1..477)
DNA (477bp) protein (159aa)
Beta-lactamase class A {ECO:0000313|EMBL:CDM65023.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CDM65023.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
Beta-lactamase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QP24_9DELT
beta-lactamase
13_1_20cm_4_scaffold_425_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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570..4160
DNA (3591bp) protein (1197aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
13_1_20cm_4_scaffold_425_3
CSP1_5_NC10, NC10, Bacteria

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4168..5088
DNA (921bp) protein (307aa)
Kelch repeat-containing protein Tax=CSP1_5_NC10
Kelch repeat-containing protein id=14429662 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Kelch repeat-containing protein
13_1_20cm_4_scaffold_425_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5096..5671
DNA (576bp) protein (192aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S9_GEMAT
hypothetical membrane protein; K02221 YggT family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function YGGT
13_1_20cm_4_scaffold_425_5
unknown

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5772..5924
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_20cm_4_scaffold_425_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5954..6991)
DNA (1038bp) protein (346aa)
qxtB; terminal oxidase subunit II (EC:1.10.3.-)
Probable terminal oxidase subunit II n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B1_SORC5
Cytochrome bd ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EYF02949.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces
13_1_20cm_4_scaffold_425_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6996..8354)
DNA (1359bp) protein (453aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACL64348.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaerom
cytochrome bd ubiquinol oxidase subunit I
13_1_20cm_4_scaffold_425_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8375..9202)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJK9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_425_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9430..11265
DNA (1836bp) protein (612aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cura
Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U0_GEMAT rbh
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
13_1_20cm_4_scaffold_425_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11319..12137
DNA (819bp) protein (273aa)
short-chain dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA465
short-chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
oxidoreductase
13_1_20cm_4_scaffold_425_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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12152..12805
DNA (654bp) protein (218aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein LinasL1_09615 id=3960252 bin=GWA2_Methylomirabilis_73_35 species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_425_12

Not on your lists

12835..13254
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06427.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
integral membrane protein
13_1_20cm_4_scaffold_425_13
unknown

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13346..13909
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_20cm_4_scaffold_425_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14008..14958
DNA (951bp) protein (317aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid permease
Displaying 14 items

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