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13_1_20cm_4_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_43_1
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..139
DNA (138bp) protein (46aa)
Metallophosphoesterase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBF9_NITWC
Metallophosphoesterase {ECO:0000313|EMBL:ADJ29606.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (
metallophosphoesterase
13_1_20cm_4_scaffold_43_2
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(185..886)
DNA (702bp) protein (234aa)
WbqC-like family protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDH3_ACIB4
WbqC-like family protein {ECO:0000313|EMBL:ADD08050.1}; WbqC-like protein family {ECO:0000313|EMBL:EDY35576.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofund
WbqC-like family protein
13_1_20cm_4_scaffold_43_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(886..1545)
DNA (660bp) protein (220aa)
Sugar transferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYI3_ALIDB
Sugar transferase {ECO:0000313|EMBL:ADV00881.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
sugar transferase
13_1_20cm_4_scaffold_43_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1674..2567
DNA (894bp) protein (298aa)
Alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase {ECO:0000313|EMBL:EPX64128.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cysto
sna:Snas_4283 metallophosphoesterase id=1246277 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_4_scaffold_43_5
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2581..3786
DNA (1206bp) protein (402aa)
Metallophosphoesterase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBF9_NITWC
Metallophosphoesterase {ECO:0000313|EMBL:ADJ29606.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (
metallophosphoesterase
13_1_20cm_4_scaffold_43_6
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4171..6639
DNA (2469bp) protein (823aa)
Polysaccharide chain length determinant protein and protein tyrosine kinase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A4J7_PELCD
Polysaccharide chain length determinant protein and protein tyrosine kinase {ECO:0000313|EMBL:ABA88710.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelo
polysaccharide chain length determinant protein and protein tyrosine kinase
13_1_20cm_4_scaffold_43_7
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

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6718..8253
DNA (1536bp) protein (512aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE8_NITWC
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJS11981.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
polysaccharide biosynthesis protein
13_1_20cm_4_scaffold_43_8
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8361..9647
DNA (1287bp) protein (429aa)
O-antigen polymerase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTL6_TRURR
O-antigen polymerase {ECO:0000313|EMBL:ADI13873.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiov
O-antigen polymerase
13_1_20cm_4_scaffold_43_9
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9659..10921
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE7_NITWC
Uncharacterized protein {ECO:0000313|EMBL:ADJ29594.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
hypothetical protein
13_1_20cm_4_scaffold_43_10
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10967..12571
DNA (1605bp) protein (535aa)
LmbE family protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DHJ6_CLOTH
LmbE family protein {ECO:0000313|EMBL:ABN53425.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain
LmbE-like protein
13_1_20cm_4_scaffold_43_11
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12574..13737
DNA (1164bp) protein (388aa)
Glycosyl transferase, group 1 n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IYJ8_NOSP7 rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACC80085.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
group 1 glycosyl transferase
13_1_20cm_4_scaffold_43_12
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13742..15355
DNA (1614bp) protein (538aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE7_NITWC rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ29594.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
hypothetical protein
13_1_20cm_4_scaffold_43_13
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15352..16131
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE6_NITWC
Uncharacterized protein {ECO:0000313|EMBL:ADJ29593.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
hypothetical protein
13_1_20cm_4_scaffold_43_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16168..16815)
DNA (648bp) protein (216aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UD95_MYXSD
Periplasmic polysaccharide export protein Tax=GWC2_Gemmatimonadetes_71_10_curated
polysaccharide export protein
13_1_20cm_4_scaffold_43_trna_1
unknown

Not on your lists

comp(17375..17447)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_43_15
unknown

Not on your lists

comp(17562..18038)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_4_scaffold_43_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18170..18814
DNA (645bp) protein (215aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_1_20cm_4_scaffold_43_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19356..19901
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7RAE3_9THEO
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75114.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
hypothetical protein
13_1_20cm_4_scaffold_43_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19997..20539
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase ECF-type sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_43_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20536..21204
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_43_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21204..22769
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_43_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23068..23433
DNA (366bp) protein (122aa)
UPI0003D7A767 related cluster n=3 Tax=Aminicenantes RepID=UPI0003D7A767
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
PBS lyase HEAT domain protein repeat-containing protein
13_1_20cm_4_scaffold_43_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

23516..26182
DNA (2667bp) protein (889aa)
membrane associated hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
membrane associated hydrolase id=24498641 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_20cm_4_scaffold_43_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

26216..26818
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q1_SPHTD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_43_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26828..27367
DNA (540bp) protein (180aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative ADP-ribose pyrophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN1_GEMAT
NUDIX hydrolase
13_1_20cm_4_scaffold_43_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

27570..28214
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_43_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28258..28746
DNA (489bp) protein (163aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_43_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28836..29927
DNA (1092bp) protein (364aa)
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7)
Putative DNA polymerase III delta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM8_GEMAT
13_1_20cm_4_scaffold_43_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29924..30784
DNA (861bp) protein (287aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Sporulation domain-containing protein
13_1_20cm_4_scaffold_43_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

30781..33396
DNA (2616bp) protein (872aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA mismatch repair protein mutS
Displaying items 1-30 of 163 in total

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