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13_1_20cm_4_scaffold_864

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_864_1
unknown

Not on your lists

3..218
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_4_scaffold_864_trna_1
unknown

Not on your lists

comp(552..625)
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_864_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1139..2113
DNA (975bp) protein (325aa)
ADP-ribosylation/crystallin J1; K05521 ADP-ribosylglycohydrolase [EC:3.2.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ADP-ribosylation/Crystallin J1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A74_SOLUE
ADP-ribosylation/crystallin J1
13_1_20cm_4_scaffold_864_3
unknown

Not on your lists

comp(2267..2695)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_4_scaffold_864_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2965..3708
DNA (744bp) protein (248aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RS7_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE72161.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
peptidase s8 and s53 subtilisin kexin sedolisin
13_1_20cm_4_scaffold_864_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3708..5228
DNA (1521bp) protein (507aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine/threonine protein kinase with FHA domain n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L0S9_FRASN
serine/threonine kinase protein
13_1_20cm_4_scaffold_864_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5225..6304
DNA (1080bp) protein (360aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_864_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6301..6945
DNA (645bp) protein (215aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_864_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6972..7274)
DNA (303bp) protein (101aa)
Septum formation initiator Tax=GWC2_Gemmatimonadetes_71_10_curated
Septum formation initiator
13_1_20cm_4_scaffold_864_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7271..8551)
DNA (1281bp) protein (427aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENO_GEMAT
Enolase
13_1_20cm_4_scaffold_864_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8565..9161)
DNA (597bp) protein (199aa)
acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1Q1_CORCM
plsC2; 1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_20cm_4_scaffold_864_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9158..10129)
DNA (972bp) protein (324aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Thiamine-monophosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y1_GEMAT
thiamine-monophosphate kinase
13_1_20cm_4_scaffold_864_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10126..11727)
DNA (1602bp) protein (534aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_864_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11742..13265)
DNA (1524bp) protein (508aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHZ2_ANADE
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD(P)H-hydrate epimerase
13_1_20cm_4_scaffold_864_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13262..14077)
DNA (816bp) protein (272aa)
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4042392 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_864_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14091..14291)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HF0130_06E03 RepID=E0XSX5_9BACT id=5225635 bin=16ft_combo_ws3_JS1 species=uncultured bacterium HF0130_06E03 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_864_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14323..14715)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
13_1_20cm_4_scaffold_864_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14712..16946)
DNA (2235bp) protein (745aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=CSP1_5_NC10
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=14428721 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
lon; ATP-dependent protease La (EC:3.4.21.53)
13_1_20cm_4_scaffold_864_18
Leptospirillum sp. Group II 'C75', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(16947..17438)
DNA (492bp) protein (164aa)
Small heat shock protein n=4 Tax=Leptospirillum RepID=J9ZEJ6_LEPFM
Putative heat shock protein (Hsp20) {ECO:0000313|EMBL:EIJ76732.1}; TaxID=1159328 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II 'C
heat-shock protein Hsp20
13_1_20cm_4_scaffold_864_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17431..18711)
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycine-serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VM08_CLOSH rbh
13_1_20cm_4_scaffold_864_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18704..19216)
DNA (513bp) protein (171aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NC31_9PORP
13_1_20cm_4_scaffold_864_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19155..20324)
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT rbh
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_864_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20308..21156)
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG94_RHOM4 rbh
3-hydroxybutyryl-CoA dehydrogenase
13_1_20cm_4_scaffold_864_23
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21153..22016)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000367248F
Putative metal-dependent membrane protease {ECO:0000313|EMBL:KIG17919.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;
abortive infection protein
13_1_20cm_4_scaffold_864_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22013..22576)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF11_TERRK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_864_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22576..23766)
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
acetyl-CoA acetyltransferase
13_1_20cm_4_scaffold_864_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23863..25683)
DNA (1821bp) protein (607aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Threonine--tRNA ligase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QXI8_PIRSD
threonyl-tRNA synthetase
13_1_20cm_4_scaffold_864_27
unknown

Not on your lists

comp(25688..25852)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_4_scaffold_864_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


25984..28644
DNA (2661bp) protein (887aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT rbh
Valyl-tRNA synthetase
13_1_20cm_4_scaffold_864_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28587..28814
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG90530.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 30 items

View Taxonomy