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13_1_20cm_4_scaffold_49_18

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(26543..28399)

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 612.0
  • Bit_score: 839
  • Evalue 2.40e-240
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 597.0
  • Bit_score: 805
  • Evalue 3.50e-230
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 594.0
  • Bit_score: 764
  • Evalue 1.90e-218

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
ATGGCCGACGACGCGACGCGATCCCGCAAAGCCGCCATCACGCCCGGCGCCTGGCAAGAGGCCCGGGCGCTGATCTACGCGCACCGCAAGCGCCTCTCGCTCGGCCTCGTGCTGCTGCTGGTGAACCGGGTGGCTGGGTTCGTGCTGCCCGCGTCGCCCAAGTGGCTCATCGATCGCGTGATCGGCCAGCACCGCCCGGAGTTGCTGCTGCCCCTCGCGCTCGCGACGGGCGCCGCGACGCTGGTTCAGGCGGTCACGGGCTTCGGCCTCTCACAGATCCTCGGCGTCGCCGCCCAGCGCGCCATCACGGACATGCGGCGCACGGTGCAGGCATATGTGCTGCGGTTGCCCGTCAGCTACTTCGATTCGACCAAGAGCGGCATCCTCATTTCGCGCATCATGACCGACGCCGAGGGCATTCGCAATCTCGTGGGAACGGGACTGGTGCAGCTCATCGGCGGCCTGCTCACGGGCGCGGTCGCGCTGGTGGTGCTCTTCGTCCTCAACTGGCGCCTCACGGCGATCGCGATCCTGATCCTCGCCTGCTTCGGCGCCGGGATGGCGCTCGCCTTCACCAAACTGCGGCCGCTGTTCCGCGAGCGCGGCAAGATCAATGCCGAGGTCACCGGGCGACTGGGCGAGACCCTGGGCGGCATCCGCATCGTCAAAGCGTACCACGCCGAGCGGAGCGAGCGGTTGGTGTTCACGCGCGGCGCGAACACGTTGTTCCGCAACATCGCTGCCACCATGACCGGCATCTCCAGCGTGGGCTCGTTCGCCACGATCATCATCGGAGCGATCGGGATATTGATGATTCTCGAGGGTGGGCGATCGGTGCTCGCGGGCGCCATGACGTTGGGCGATCTGTTCATGTACGGGATCTTCGTCGGTCTCGTGGCGATGCCGCTCATCAATATCGCGTCCATCGGCACGCAGATCACCGAGGCGTTCGCCGGACTCGACCGGATCCGGGAGATCCGCAAGCTCGTGACCGAAGATTCGGAAGATGGCGCACGCGCCGCACTGGACGACGTGCGCGGCGATATCGTGTTCGAAGACGTGAGCTTCGCCTACGTGCCGGGGAAGGACGTGCTGAAGCGCGTGTCGTTCCAGGCGCCGCCGGGCTCCACCACCGCGCTGGTCGGGTCGTCCGGGGCGGGGAAGAGCACGCTGATCGGCCTCGTGCTGGCGTTCAACCGCCCGAGCGCCGGCCGGATCGTGGTGGACGGCCGGGACTTGGCGACCATCCGGTTGGCCGAGTACCGCCGCCAGCTGGGCGTGGTGCTGCAGGACAATTTCCTGTTCGACGGCACGATCGCGGAAAACATCGCGTTCGCGCGGCCCCACGCGACGCGGGAGGAAATCGAGGCCGCCGCCCGGATCGCGCATTGCGACGATTTCGTGCGCCGGTTCGACAAGGGCTACGACACGGTGGTGGGCGAGCGGGGGGTGAAGCTGTCGGGCGGCGAGCGCCAGCGCGTCTCGATCGCCCGAGCCATCCTGGCCGATCCCCGGATCCTGATCCTCGACGAGGCCACGTCGAGCCTCGACTCGGAGAGCGAGGCGGCGATCCAGGACGGGCTCCGCACCCTGCGGCGCGGCCGCACGACCTTCGTGATCGCCCACCGGCTCTCGACCATCCGCAGCGCCGACCAGATCCTGGTGATGGAAGGGGGCGAGATCGTGGAGCGCGGCACGCACTCCGAGCTGCTCGCCAAGCACGGGCGGTACCGCCAGTTGTACGACAAGCAATACCACTTCGAGCAGGACCTGTTCATCAACCCCGGCGAGGACTTCACCCCCGAGCCCGAGGCCCCGGCGGTGGCGACCCCGGTGACTCCTCCCACCCGGCTGTGA
PROTEIN sequence
Length: 619
MADDATRSRKAAITPGAWQEARALIYAHRKRLSLGLVLLLVNRVAGFVLPASPKWLIDRVIGQHRPELLLPLALATGAATLVQAVTGFGLSQILGVAAQRAITDMRRTVQAYVLRLPVSYFDSTKSGILISRIMTDAEGIRNLVGTGLVQLIGGLLTGAVALVVLFVLNWRLTAIAILILACFGAGMALAFTKLRPLFRERGKINAEVTGRLGETLGGIRIVKAYHAERSERLVFTRGANTLFRNIAATMTGISSVGSFATIIIGAIGILMILEGGRSVLAGAMTLGDLFMYGIFVGLVAMPLINIASIGTQITEAFAGLDRIREIRKLVTEDSEDGARAALDDVRGDIVFEDVSFAYVPGKDVLKRVSFQAPPGSTTALVGSSGAGKSTLIGLVLAFNRPSAGRIVVDGRDLATIRLAEYRRQLGVVLQDNFLFDGTIAENIAFARPHATREEIEAAARIAHCDDFVRRFDKGYDTVVGERGVKLSGGERQRVSIARAILADPRILILDEATSSLDSESEAAIQDGLRTLRRGRTTFVIAHRLSTIRSADQILVMEGGEIVERGTHSELLAKHGRYRQLYDKQYHFEQDLFINPGEDFTPEPEAPAVATPVTPPTRL*