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13_1_20cm_4_scaffold_49

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_49_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..2026)
DNA (2025bp) protein (675aa)
ASPIC/UnbV domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI6_RHOM4
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG93775.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ASPIC/UnbV domain protein
13_1_20cm_4_scaffold_49_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3059..4633)
DNA (1575bp) protein (525aa)
RagB/SusD domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI7_RHOM4
RagB/SusD domain protein {ECO:0000313|EMBL:ACY48645.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
RagB/SusD domain-containing protein
13_1_20cm_4_scaffold_49_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4648..7824)
DNA (3177bp) protein (1059aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI8_RHOM4
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93779.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane protein, SusC/RagA
13_1_20cm_4_scaffold_49_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7940..10240
DNA (2301bp) protein (767aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000366F4E9
Uncharacterized protein {ECO:0000313|EMBL:AHG93807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_49_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10237..11442
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG88245.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
major facilitator superfamily MFS_1
13_1_20cm_4_scaffold_49_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

11609..12733
DNA (1125bp) protein (375aa)
Rieske (2Fe-2S) domain protein n=2 Tax=Chloroflexus RepID=A9WGM6_CHLAA
hypothetical protein; K00479 Rieske 2Fe-2S family protein Tax=RBG_16_Chloroflexi_54_18_curated
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_4_scaffold_49_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12780..13136)
DNA (357bp) protein (119aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP0_SOLUE
cupin domain protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cupin 2 conserved barrel domain protein
13_1_20cm_4_scaffold_49_8
unknown

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13375..13920
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_4_scaffold_49_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(13948..15588)
DNA (1641bp) protein (547aa)
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
gatA2; amidase
13_1_20cm_4_scaffold_49_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15609..16145)
DNA (537bp) protein (179aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI0003628EE6
Peptide methionine sulfoxide reductase msrB
13_1_20cm_4_scaffold_49_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16203..18422)
DNA (2220bp) protein (740aa)
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:CDM64118.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CDM64118.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 protein id=2725679 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_20cm_4_scaffold_49_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18554..21571
DNA (3018bp) protein (1006aa)
OmpA-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QH43_9DELT
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent receptor plug
13_1_20cm_4_scaffold_49_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21646..23103
DNA (1458bp) protein (486aa)
UPI00026CBFC3 related cluster n=1 Tax=unknown RepID=UPI00026CBFC3 id=5223543 bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Protein of unknown function DUF2329
13_1_20cm_4_scaffold_49_14
unknown

Not on your lists

comp(23126..23611)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_4_scaffold_49_15
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

23721..24377
DNA (657bp) protein (219aa)
LuxR family two component transcriptional regulator Tax=RBG_16_Zixibacteria_53_22_curated
two-component system response regulator id=717628 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
two component LuxR family transcriptional regulator
13_1_20cm_4_scaffold_49_16
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24435..26099
DNA (1665bp) protein (555aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T982_NIAKG rbh
radical SAM protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
Elongator protein 3/MiaB/NifB
13_1_20cm_4_scaffold_49_17
unknown

Not on your lists

comp(26096..26461)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_4_scaffold_49_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(26543..28399)
DNA (1857bp) protein (619aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_20cm_4_scaffold_49_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(28488..29774)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
hypothetical protein
13_1_20cm_4_scaffold_49_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30048..30806)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000349030E rbh
Uncharacterized protein {ECO:0000313|EMBL:EAU67685.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
hypothetical protein
13_1_20cm_4_scaffold_49_21
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30803..31777)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI000300A21F
transcriptional regulator Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_1_20cm_4_scaffold_49_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31931..32386
DNA (456bp) protein (152aa)
Amino acid transporter-like protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF01_ANADF
amino acid transporter-like protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
amino acid transporter-like protein
13_1_20cm_4_scaffold_49_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32423..33694
DNA (1272bp) protein (424aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF445
13_1_20cm_4_scaffold_49_24
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

33708..35447
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YT69_9ALTE rbh
amidohydrolase Tax=RBG_13_Acidobacteria_68_16_curated
amidohydrolase
13_1_20cm_4_scaffold_49_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(35635..38493)
DNA (2859bp) protein (953aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92913.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Displaying 25 items

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