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13_1_20cm_4_scaffold_116

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_116_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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142..588
DNA (447bp) protein (149aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Methylosarcina fibrata RepID=UPI000379B215
Uncharacterized protein {ECO:0000313|EMBL:CAD84882.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
phnB; hypothetical protein
13_1_20cm_4_scaffold_116_2
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

651..1106
DNA (456bp) protein (152aa)
hypothetical protein Tax=GWC2_Pelobacteraceae_58_13_curated
Activator of Hsp90 ATPase 1 family protein id=4697419 bin=GWC2_Pelobacter_58_13 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_20cm_4_scaffold_116_3
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1239..2249
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037214E7
WD40-like Beta Propeller Repeat {ECO:0000313|EMBL:GAO02153.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacter
Xaa-Pro aminopeptidase-like protein
13_1_20cm_4_scaffold_116_4
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2267..2689
DNA (423bp) protein (141aa)
Putative acetyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6RZH0_9FLAO
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGO93120.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteri
putative acetyltransferase
13_1_20cm_4_scaffold_116_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2864..3352
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZM97_OPITP
Uncharacterized protein {ECO:0000313|EMBL:ACB73350.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
hypothetical protein
13_1_20cm_4_scaffold_116_6
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3533..4588
DNA (1056bp) protein (352aa)
AraC family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7G3_MYXSD
AraC family transcriptional regulator {ECO:0000313|EMBL:AGC43502.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
AraC family transcriptional regulator
13_1_20cm_4_scaffold_116_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(4834..7989)
DNA (3156bp) protein (1052aa)
TonB-dependent receptor n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUE9_OPITP
TonB-dependent receptor {ECO:0000313|EMBL:ACB73992.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strai
TonB-dependent receptor
13_1_20cm_4_scaffold_116_8
unknown

Not on your lists

8305..8670
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_4_scaffold_116_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8758..9204)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CK74_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL73249.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
13_1_20cm_4_scaffold_116_10

Not on your lists

comp(9332..10294)
DNA (963bp) protein (321aa)
K channel inward rectifier conserved region 2 domain protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KEM4_CYAP7
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48373.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
K channel inward rectifier domain-containing protein
13_1_20cm_4_scaffold_116_11

Not on your lists

comp(10822..11355)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QGT8_RHOPT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48372.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_116_12

Not on your lists

comp(11538..12989)
DNA (1452bp) protein (484aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXC0_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48360.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ErfK/YbiS/YcfS/YnhG family protein
13_1_20cm_4_scaffold_116_13

Not on your lists

13048..14442
DNA (1395bp) protein (465aa)
protease Do (EC:3.4.21.108)
2-alkenal reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3B1_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48359.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_116_14

Not on your lists

comp(14439..14660)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZH1_TERSS
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48358.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_116_15

Not on your lists

comp(14671..14820)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBL4_GEOBB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48357.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_116_16

Not on your lists

comp(14939..16756)
DNA (1818bp) protein (606aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|SAAS:SAAS00085795}; EC=4.2.1.126 {ECO:0000256|SAAS:SAAS00085795};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bac
Glucokinase regulatory-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB58_9BACT
N-acetylglucosamine kinase fused to sugar phosphate isomerase
13_1_20cm_4_scaffold_116_17

Not on your lists

16855..19014
DNA (2160bp) protein (720aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IXK8_9BACT
13_1_20cm_4_scaffold_116_18

Not on your lists

comp(19069..20169)
DNA (1101bp) protein (367aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0E7_9BACT rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48354.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
degQ; Serine protease Do (heat-shock protein)
13_1_20cm_4_scaffold_116_19

Not on your lists

comp(20234..20725)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0E8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48353.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_116_20

Not on your lists

comp(20739..21335)
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0E9_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48352.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_116_21

Not on your lists

comp(21352..22038)
DNA (687bp) protein (229aa)
Peptidase membrane zinc metallopeptidase putative n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EQS1_CHLPB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48351.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptidase membrane zinc metallopeptidase
13_1_20cm_4_scaffold_116_22

Not on your lists

comp(22262..23482)
DNA (1221bp) protein (407aa)
Peptidase M24 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0F0_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48350.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
pepP; Xaa-Pro aminopeptidase
13_1_20cm_4_scaffold_116_23

Not on your lists

comp(23488..27099)
DNA (3612bp) protein (1204aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745643 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48349.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter
13_1_20cm_4_scaffold_116_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27341..29089
DNA (1749bp) protein (583aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobact
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3K9_9BACT
hflB; ATP-dependent Zn protease FtsH
Displaying 24 items

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