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13_1_20cm_4_scaffold_2002

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2002_1
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

3..1844
DNA (1842bp) protein (614aa)
Adenylate/guanylate cyclase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:BAL59164.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_2002_2
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1841..2053)
DNA (213bp) protein (71aa)
Tax=BJP_IG2158_Anaerolineales_38_74
13_1_20cm_4_scaffold_2002_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2201..3790)
DNA (1590bp) protein (530aa)
O-succinylbenzoate-CoA ligase n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034D6A34
AMP-binding enzyme family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
AMP-binding enzyme family protein
13_1_20cm_4_scaffold_2002_4
unknown

Not on your lists

comp(3836..4855)
DNA (1020bp) protein (340aa)

This feature has no annotations

13_1_20cm_4_scaffold_2002_5
unknown

Not on your lists

comp(5091..5498)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_4_scaffold_2002_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5653..6141)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AE9F
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
13_1_20cm_4_scaffold_2002_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6417..7415)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPM6_KORVE rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF41174.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_4_scaffold_2002_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7528..9021
DNA (1494bp) protein (498aa)
Transcriptional regulator, GntR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJQ8_KORVE rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABF42892.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
GntR family transcriptional regulator
13_1_20cm_4_scaffold_2002_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9122..9580
DNA (459bp) protein (153aa)
GreA/GreB family elongation factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEY1_9BACT
GreA/GreB family elongation factor {ECO:0000313|EMBL:EEF61479.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" s
GreA/GreB family elongation factor
13_1_20cm_4_scaffold_2002_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9635..11752)
DNA (2118bp) protein (706aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Serine/threonine protein kinase id=4176863 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
hypothetical protein
13_1_20cm_4_scaffold_2002_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11895..12803
DNA (909bp) protein (303aa)
Phenazine biosynthesis PhzC/PhzF protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT31_KORVE
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:ABF39969.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
phenazine biosynthesis PhzC/PhzF protein
13_1_20cm_4_scaffold_2002_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12897..13820)
DNA (924bp) protein (308aa)
Proline iminopeptidase {ECO:0000313|EMBL:AIE87662.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginseng
proline iminopeptidase
Peptidase family S33 id=4182421 bin=GWF2_Bacteroidetes_33_16 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
13_1_20cm_4_scaffold_2002_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13823..14485)
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00036BFA47
Thioredoxin reductase (NADPH) {ECO:0000313|EMBL:ERF83970.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizob
transcriptional regulator
13_1_20cm_4_scaffold_2002_14
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14602..15189
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A7A5E
Uncharacterized protein {ECO:0000313|EMBL:KFN49686.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
13_1_20cm_4_scaffold_2002_15
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15277..15894
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003809F35
Uncharacterized protein {ECO:0000313|EMBL:AFE07176.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_1_20cm_4_scaffold_2002_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16264..16788)
DNA (525bp) protein (175aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI000347FF7C
hypothetical protein
13_1_20cm_4_scaffold_2002_17
Erwinia billingiae, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16950..18446
DNA (1497bp) protein (499aa)
putative DNA-3-methyladenine glycosidase II n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B06 rbh
Putative DNA-3-methyladenine glycosidase II {ECO:0000313|EMBL:CAX58844.1}; TaxID=634500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source
alkA; DNA-3-methyladenine glycosidase II
13_1_20cm_4_scaffold_2002_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18570..19958)
DNA (1389bp) protein (463aa)
Amino acid/peptide transporter n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XP09_HIRBI rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAO39817.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
amino acid/peptide transporter
13_1_20cm_4_scaffold_2002_19
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19982..20707
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458A8
Uncharacterized protein {ECO:0000313|EMBL:ABF86699.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
hypothetical protein
13_1_20cm_4_scaffold_2002_20
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20864..21934
DNA (1071bp) protein (357aa)
Mannitol dehydrogenase {ECO:0000313|EMBL:AFY35870.1}; EC=1.1.1.255 {ECO:0000313|EMBL:AFY35870.1};; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothr
mannitol dehydrogenase (EC:1.1.1.255)
Mannitol dehydrogenase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PR56_9CYAN rbh
13_1_20cm_4_scaffold_2002_21
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22039..23028
DNA (990bp) protein (330aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EAX2_GEOBB rbh
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:ACH37431.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="
aldo/keto reductase family oxidoreductase
13_1_20cm_4_scaffold_2002_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23109..23591
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6S6_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ABQ27494.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniired
hypothetical protein
13_1_20cm_4_scaffold_2002_23
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24058..24798)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFG3_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:CCE99795.2}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
13_1_20cm_4_scaffold_2002_24
unknown

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comp(24813..25646)
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_20cm_4_scaffold_2002_25
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(25767..26543)
DNA (777bp) protein (259aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FWF0_STIAD
DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
LytTr DNA-binding region
13_1_20cm_4_scaffold_2002_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26540..27412)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0M5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP37725.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
Displaying 26 items

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