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13_1_20cm_4_scaffold_205

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_205_1
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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1..315
DNA (315bp) protein (105aa)
heavy metal sensor signal transduction histidine kinase (EC:2.7.13.3); K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Gammapro
Heavy metal sensor signal transduction histidine kinase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMW9_9GAMM
heavy metal sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_205_2
unknown

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675..1160
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_4_scaffold_205_3
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

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1144..2211
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXW5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACO70938.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
13_1_20cm_4_scaffold_205_trna_1
unknown

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3060..3154
DNA (95bp)
transferRNA
13_1_20cm_4_scaffold_205_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3351..4286
DNA (936bp) protein (312aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Actinobacteria_64_13_curated
Selenide,water dikinase, selenocysteine-containing (EC:2.7.9.3)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00035CF57E
13_1_20cm_4_scaffold_205_5

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4271..5695
DNA (1425bp) protein (475aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
selA; selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN0_9BACT
13_1_20cm_4_scaffold_205_6

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5692..7650
DNA (1959bp) protein (653aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN1_9BACT rbh
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AAY89283.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
13_1_20cm_4_scaffold_205_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7625..10507
DNA (2883bp) protein (961aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21674.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_205_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10526..13714
DNA (3189bp) protein (1063aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW83_9BACT rbh
13_1_20cm_4_scaffold_205_9
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13752..14855)
DNA (1104bp) protein (368aa)
UPI0003D1C6C3 related cluster n=1 Tax=unknown RepID=UPI0003D1C6C3 rbh
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:ETA67748.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanol
myo-inositol-1-phosphate synthase
13_1_20cm_4_scaffold_205_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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15075..16469
DNA (1395bp) protein (465aa)
Outer membrane efflux protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCA7_9BACT
outer membrane efflux protein Tax=GWF2_Verrucomicrobia_62_7_curated
hypothetical protein
13_1_20cm_4_scaffold_205_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16466..17929
DNA (1464bp) protein (488aa)
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein Tax=GWF2_Verrucomicrobia_62_7_curated
13_1_20cm_4_scaffold_205_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18194..19300
DNA (1107bp) protein (369aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZM7_OPITP
RND family efflux transporter MFP subunit Tax=GWF2_Verrucomicrobia_62_7_curated
RND family efflux transporter MFP subunit
13_1_20cm_4_scaffold_205_13
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

19297..20532
DNA (1236bp) protein (412aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ANH2_9BACT
hypothetical protein; K09808 lipoprotein-releasing system permease protein Tax=GWF2_Verrucomicrobia_62_7_curated
hypothetical protein
13_1_20cm_4_scaffold_205_14
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20529..21245
DNA (717bp) protein (239aa)
ABC transporter-like protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=GWF2_Verrucomicrobia_62_7_curated
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZD9_OPITP
ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_205_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21328..22596
DNA (1269bp) protein (423aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LME6_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:ETX08266.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
CDP-alcohol phosphatidyltransferase
13_1_20cm_4_scaffold_205_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22468..23610)
DNA (1143bp) protein (381aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
radical SAM superfamily protein id=109905 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
radical SAM superfamily protein
13_1_20cm_4_scaffold_205_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(23635..24804)
DNA (1170bp) protein (390aa)
Putative LmbE-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLR3_9GAMM
putative LmbE-like protein Tax=RBG_13_Acidobacteria_68_16_curated
putative LmbE-like protein
13_1_20cm_4_scaffold_205_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(24917..26659)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D568_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY18273.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_4_scaffold_205_19
unknown

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26708..27157
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_20cm_4_scaffold_205_20
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(27154..28665)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KHZ7_STRNV
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
Hypothetical protein
13_1_20cm_4_scaffold_205_21
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(28677..29924)
DNA (1248bp) protein (416aa)
ADP-heptose Tax=GWF2_Planctomycetes_42_9_curated
ADP-heptose id=4670584 bin=GWF2_Planctomycetes_42_9 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes rbh
glycosyl transferase
13_1_20cm_4_scaffold_205_22
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30223..30918
DNA (696bp) protein (232aa)
Polysaccharide biosynthesis protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H9U7_9RHIZ
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EPE95612.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
polysaccharide biosynthesis protein
13_1_20cm_4_scaffold_205_23
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

30882..31640
DNA (759bp) protein (253aa)
Polysaccharide biosynthesis protein n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EP69_CHLPB
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACE05208.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source=
polysaccharide biosynthesis protein
13_1_20cm_4_scaffold_205_24
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

31604..32443
DNA (840bp) protein (280aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=GWF2_Verrucomicrobia_62_7_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZV5_OPITP
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_205_25
RLO_PLX_64_10, Bacteria

Not on your lists

32440..33270
DNA (831bp) protein (277aa)
glucose-1-phosphate thymidylyl transferase (EC:2.7.7.24) Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Nucleotidyl transferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHX8_RHOM4
nucleotidyltransferase
13_1_20cm_4_scaffold_205_26
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(33087..33863)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382C13B
membrane protein Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
hypothetical protein
13_1_20cm_4_scaffold_205_27
unknown

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comp(34207..34650)
DNA (444bp) protein (148aa)

This feature has no annotations

Displaying 28 items

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