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13_1_20cm_4_scaffold_373

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_373_1
unknown

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1..645
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_20cm_4_scaffold_373_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1083..1961)
DNA (879bp) protein (293aa)
UspA domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD72_9BACT
UspA domain protein {ECO:0000313|EMBL:EEF62018.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedospha
UspA domain-containing protein
13_1_20cm_4_scaffold_373_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1967..2893)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62019.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_20cm_4_scaffold_373_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2898..3140)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD74_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62020.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
13_1_20cm_4_scaffold_373_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3347..3580
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60825.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
gloB; Zn-dependent hydrolase, glyoxylase family
13_1_20cm_4_scaffold_373_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3614..4456
DNA (843bp) protein (281aa)
Phosphomethylpyrimidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0W4_9BACT
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EDY19976.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphomethylpyrimidine kinase
13_1_20cm_4_scaffold_373_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4488..5177)
DNA (690bp) protein (230aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rnc; ribonuclease III (EC:3.1.26.3)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00036E32F9
13_1_20cm_4_scaffold_373_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5298..6425)
DNA (1128bp) protein (376aa)
Peptidase S41 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0W2_9BACT
Peptidase S41 {ECO:0000313|EMBL:EDY19974.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
prc: C-terminal processing peptidase
13_1_20cm_4_scaffold_373_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6504..7820)
DNA (1317bp) protein (439aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0W3_9BACT rbh
13_1_20cm_4_scaffold_373_10
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(7846..8919)
DNA (1074bp) protein (358aa)
HtrA2 peptidase (EC:3.4.21.108)
2-alkenal reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJY8_9BACT
Trypsin-like serine proteases {ECO:0000313|EMBL:GAN34699.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" so
13_1_20cm_4_scaffold_373_11
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9158..9415
DNA (258bp) protein (86aa)
Transcriptional regulator, HxlR family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X8A9_9CHRO
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AFZ28703.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 742
transcriptional regulator, HxlR family
13_1_20cm_4_scaffold_373_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9492..11075
DNA (1584bp) protein (528aa)
Na+/H+ antiporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMX7_9BACT
Na+/H+ antiporter {ECO:0000313|EMBL:EEF58773.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
Na+/H+ antiporter
13_1_20cm_4_scaffold_373_13
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11155..12042)
DNA (888bp) protein (296aa)
Sulfotransferase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS29_9RHOB
Sulfotransferase {ECO:0000313|EMBL:EEB82640.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
Sulfotransferase family
13_1_20cm_4_scaffold_373_14
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12106..13062)
DNA (957bp) protein (319aa)
Sulfotransferase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS29_9RHOB
Sulfotransferase {ECO:0000313|EMBL:EEB82640.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
hypothetical protein
13_1_20cm_4_scaffold_373_15

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13191..13835
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAH3_ANADF
Uncharacterized protein {ECO:0000313|EMBL:AHN97878.1}; TaxID=1447237 species="Bacteria; environmental samples.;" source="uncultured bacterium lac127.;"
hypothetical protein
13_1_20cm_4_scaffold_373_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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13898..14434
DNA (537bp) protein (179aa)
Putative signal transduction protein with CBS domains n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMQ1_9BACT
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:EEF58826.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision
signal transduction protein with CBS domains
13_1_20cm_4_scaffold_373_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(14652..15935)
DNA (1284bp) protein (428aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=497964 species="B
Dihydroorotase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D108_9BACT rbh
pyrC; dihydroorotase
13_1_20cm_4_scaffold_373_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(15932..16861)
DNA (930bp) protein (310aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=497964 species="Bac
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D106_9BACT
13_1_20cm_4_scaffold_373_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(16878..17441)
DNA (564bp) protein (188aa)
Bifunctional protein PyrR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D105_9BACT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoribosyltransferase
13_1_20cm_4_scaffold_373_20
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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comp(17489..17734)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5ERF2_CORAD
Uncharacterized protein {ECO:0000313|EMBL:ADE55996.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajim
hypothetical protein
13_1_20cm_4_scaffold_373_21

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comp(17891..18931)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D103_9BACT rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49397.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mrp; Mrp protein, an chromosome partitioning ATPase
13_1_20cm_4_scaffold_373_22
unknown

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comp(18981..20279)
DNA (1299bp) protein (433aa)

This feature has no annotations

Displaying 22 items

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