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13_1_20cm_4_scaffold_399

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_399_1
unknown

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_20cm_4_scaffold_399_2
unknown

Not on your lists

comp(262..609)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_4_scaffold_399_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(685..1299)
DNA (615bp) protein (205aa)
Putative adenylate cyclase protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GZK1_9PROT
cyclase/kinase Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_4_scaffold_399_4
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1408..1920)
DNA (513bp) protein (171aa)
OsmC family protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6CJ05_BACAZ
OsmC family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_20cm_4_scaffold_399_5
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2180..3565)
DNA (1386bp) protein (462aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI00036FC992 rbh
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AFD06464.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea
FAD/FMN-dependent dehydrogenase
13_1_20cm_4_scaffold_399_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

3674..5296
DNA (1623bp) protein (541aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
5'-nucleotidase Tax=GWF2_Lentisphaerae_57_35_curated
Nucleotidase id=4214184 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_20cm_4_scaffold_399_7
unknown

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5345..6097
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_20cm_4_scaffold_399_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6210..7373
DNA (1164bp) protein (388aa)
L-aminopeptidase DmpA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT02_KORVE rbh
L-aminopeptidase DmpA {ECO:0000313|EMBL:ABF39998.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
aminopeptidase DmpA
13_1_20cm_4_scaffold_399_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7385..8023
DNA (639bp) protein (213aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=497964 sp
Putative 3-methyladenine DNA glycosylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR3_9BACT
3-methyladenine DNA glycosylase
13_1_20cm_4_scaffold_399_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8059..9267
DNA (1209bp) protein (403aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D711_9BACT rbh
trmU; tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
13_1_20cm_4_scaffold_399_11
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9273..9593
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036CABB1
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KHD32590.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomona
hypothetical protein
13_1_20cm_4_scaffold_399_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9622..11043)
DNA (1422bp) protein (474aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025N4_SOLUE
Amino acid permease-associated region {ECO:0000313|EMBL:AHG88670.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid permease-associated region
13_1_20cm_4_scaffold_399_13

Not on your lists

comp(11239..11760)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZ83_METI4
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49165.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_399_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11888..12541)
DNA (654bp) protein (218aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=497964 specie
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5A8_9BACT
peptidase M15D vanX D-ala-D-ala dipeptidase
13_1_20cm_4_scaffold_399_15
Trichinella spiralis, Trichinella, Trichocephalida, Dorylaimia, Nematoda, Metazoa

Not on your lists

comp(12550..14352)
DNA (1803bp) protein (601aa)
Paramyosin {ECO:0000313|EMBL:ABO09862.1}; TaxID=6334 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella.;" source="Trichinella spiralis
13_1_20cm_4_scaffold_399_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14519..16276)
DNA (1758bp) protein (586aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLV4_9BACT
Displaying 16 items

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