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13_1_20cm_4_scaffold_5366

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5366_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1..219
DNA (219bp) protein (73aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=497964 species="Bacte
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N7_9BACT
13_1_20cm_4_scaffold_5366_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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302..652
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037C5ED7
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
50S ribosomal protein L21
13_1_20cm_4_scaffold_5366_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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704..961
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCG4_9BACT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpmA; 50S ribosomal protein L27
13_1_20cm_4_scaffold_5366_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1018..1617
DNA (600bp) protein (200aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYD1_9BACT
adenylate kinase
13_1_20cm_4_scaffold_5366_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1664..1846
DNA (183bp) protein (61aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
13_1_20cm_4_scaffold_5366_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1852..2808
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=497964 species="B
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYD2_9BACT
13_1_20cm_4_scaffold_5366_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2905..3645
DNA (741bp) protein (247aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCQ3_9BACT rbh
13_1_20cm_4_scaffold_5366_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3658..4218
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCQ4_9BACT
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
ribosome recycling factor
13_1_20cm_4_scaffold_5366_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4379..4621)
DNA (243bp) protein (81aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYL1_9BACT
sufA; Fe-S cluster assembly scaffold protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
sufA; Fe-S cluster assembly scaffold protein
13_1_20cm_4_scaffold_5366_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4631..5614)
DNA (984bp) protein (328aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Ch
transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B2E
nifR3 family TIM-barrel protein
13_1_20cm_4_scaffold_5366_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5672..6181)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU58_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22096.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_5366_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6178..7317)
DNA (1140bp) protein (380aa)
Permease YjgP/YjgQ family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU57_9BACT
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:EDY22095.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
permease, YjgP/YjgQ family
13_1_20cm_4_scaffold_5366_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7531..9513
DNA (1983bp) protein (661aa)
Helicase c2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6W3_9BACT rbh
Helicase c2 {ECO:0000313|EMBL:EDY17914.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
helicase c2
13_1_20cm_4_scaffold_5366_14
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

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9894..10487
DNA (594bp) protein (198aa)
Nucleotidyltransferase/DNA polymerase n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXS2_9BACT
Nucleotidyltransferase/DNA polymerase {ECO:0000313|EMBL:ACO70895.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
DNA repair nucleotidyltransferase/DNA polymerase-like protein
13_1_20cm_4_scaffold_5366_15
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

Not on your lists

10606..13884
DNA (3279bp) protein (1093aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; Flags: Fragment;; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" so
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit (Fragment) n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXW4_9BACT
13_1_20cm_4_scaffold_5366_16
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13949..14224)
DNA (276bp) protein (92aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=401
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPQ8_9FIRM
13_1_20cm_4_scaffold_5366_17
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(14197..15315)
DNA (1119bp) protein (373aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=118
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLK6_GLOVI
Displaying 17 items

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