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13_1_20cm_4_scaffold_5690

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5690_1
unknown

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3..233
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_5690_2
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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328..753
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KAJ95676.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornit
13_1_20cm_4_scaffold_5690_3
unknown

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772..1071
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_4_scaffold_5690_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1122..1736)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW84_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21676.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoesterase (MutT family)-like protein
13_1_20cm_4_scaffold_5690_5
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1859..2470)
DNA (612bp) protein (204aa)
Outer membrane protein W n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E0A1_METI4
ompW; Outer membrane protein W
Tax=GWF2_Verrucomicrobia_62_7_curated
13_1_20cm_4_scaffold_5690_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2539..3327)
DNA (789bp) protein (263aa)
Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5D1_9BACT
Pseudouridine synthase {ECO:0000313|EMBL:EDY18336.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
pseudouridine synthase
13_1_20cm_4_scaffold_5690_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3458..3874
DNA (417bp) protein (139aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D216_9BACT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EDY19778.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus
acetyl-CoA carboxylase, biotin carboxyl carrier protein
13_1_20cm_4_scaffold_5690_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3957..5144
DNA (1188bp) protein (396aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D215_9BACT
acetyl-CoA carboxylase, biotin carboxylase
13_1_20cm_4_scaffold_5690_9
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5243..6184
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGN0_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:ABK16582.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacte
hypothetical protein
13_1_20cm_4_scaffold_5690_10

Not on your lists

6190..6408
DNA (219bp) protein (73aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48644.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_5690_11
unknown

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6519..6839
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_4_scaffold_5690_trna_1
unknown

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comp(6905..6976)
DNA (72bp)
transferRNA
13_1_20cm_4_scaffold_5690_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7150..8430
DNA (1281bp) protein (427aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWU3_9BACT
glutamate-1-semialdehyde-2,1-aminomutase
13_1_20cm_4_scaffold_5690_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8604..10922
DNA (2319bp) protein (773aa)
Glycosyl transferase family 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBK9_9BACT rbh
wcaA; glycosyltransferase Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
wcaA; glycosyltransferase
Displaying 14 items

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