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13_1_20cm_4_scaffold_671

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_671_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2..268
-----------------
DNA (267bp)
protein (89aa)
30S ribosomal protein S6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA1_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_671_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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287..736
-----------------
DNA (450bp)
protein (150aa)
single-stranded DNA-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745814
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spa
single-strand binding protein
13_1_20cm_4_scaffold_671_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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770..1870
-----------------
DNA (1101bp)
protein (367aa)
DNA protecting protein DprA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D957_9BACT
DNA protecting protein DprA {ECO:0000313|EMBL:EDY17102.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA protecting protein DprA
13_1_20cm_4_scaffold_671_4
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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1964..4876
-----------------
DNA (2913bp)
protein (971aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1K8_AZOSB
13_1_20cm_4_scaffold_671_5
R_SM2F11_45_18, SM2F11, Bacteria

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comp(4900..5925)
-----------------
DNA (1026bp)
protein (342aa)
Putative permease, DMT superfamily n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A7I6_DESDJ
DMT(drug/metabolite transporter) superfamily permease Tax=RIFCSPHIGHO2_01_FULL_SM2F11_45_18_curated
permease, DMT superfamily
13_1_20cm_4_scaffold_671_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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6151..6705
-----------------
DNA (555bp)
protein (185aa)
NrdR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E16
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=GWF2_Lentisphaerae_57_35_curated
ATP-cone domain-containing protein
13_1_20cm_4_scaffold_671_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6692..7258
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D973_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16976.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_4_scaffold_671_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7374..7709
-----------------
DNA (336bp)
protein (112aa)
zinc-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A9E9B
Histidine triad (HIT) protein {ECO:0000313|EMBL:EDY16977.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
histidine triad (HIT) protein
13_1_20cm_4_scaffold_671_9
unknown

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comp(7775..8062)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

13_1_20cm_4_scaffold_671_10
unknown

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8584..8790
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

13_1_20cm_4_scaffold_671_11
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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8893..10191
-----------------
DNA (1299bp)
protein (433aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V9D8_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:AGH95992.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio
hypothetical protein
13_1_20cm_4_scaffold_671_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10282..10722
-----------------
DNA (441bp)
protein (147aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=497964 species="Bacteria; Ve
Endoribonuclease YbeY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP4_9BACT
hypothetical protein
13_1_20cm_4_scaffold_671_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10763..11218
-----------------
DNA (456bp)
protein (152aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP2_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
clpS; ATP-dependent Clp protease adapter protein ClpS
Displaying 13 items

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