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13_1_20cm_4_scaffold_69

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_69_1
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..1448)
DNA (1446bp) protein (482aa)
APHP domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF53_9BACT
Ig-like domain-containing surface protein {ECO:0000313|EMBL:EJL63285.1}; Flags: Precursor; Fragment;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
outer membrane adhesin-like protein
13_1_20cm_4_scaffold_69_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1563..2129)
DNA (567bp) protein (189aa)
mltE; Soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=GWF2_Lentisphaerae_57_35_curated
Lytic transglycosylase catalytic id=4049086 bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
mltE; Soluble lytic murein transglycosylase
13_1_20cm_4_scaffold_69_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2223..4463
DNA (2241bp) protein (747aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=497964 species="Bacteria; V
Primosomal protein N n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7U4_9BACT
primosomal protein N'
13_1_20cm_4_scaffold_69_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4568..6094)
DNA (1527bp) protein (509aa)
electron transfer flavoprotein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744DE5 rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDY21682.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative oxidoreductase
13_1_20cm_4_scaffold_69_5
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6231..7538
DNA (1308bp) protein (436aa)
Sodium/hydrogen exchanger n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZG4_RHOFD rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ABD68839.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferriredu
sodium/hydrogen exchanger
13_1_20cm_4_scaffold_69_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(7625..8995)
DNA (1371bp) protein (457aa)
Putative Dehyrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXP8_SORC5
tryptophan halogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dehydrogenase
13_1_20cm_4_scaffold_69_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9279..12911
DNA (3633bp) protein (1211aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C63CB
Patatin-like phospholipase {ECO:0000313|EMBL:GAM10153.1}; Flags: Precursor;; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" sour
hypothetical protein
13_1_20cm_4_scaffold_69_8

Not on your lists

12981..13568
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV42_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49418.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_69_9

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comp(13656..15401)
DNA (1746bp) protein (582aa)
gamma-glutamyltransferase n=1 Tax=Kangiella aquimarina RepID=UPI000365CCF5
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49419.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gamma-glutamyltransferase
13_1_20cm_4_scaffold_69_10

Not on your lists

15471..15680
DNA (210bp) protein (70aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49420.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_69_11

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comp(15770..16150)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLH7_DESB2
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49421.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_4_scaffold_69_12

Not on your lists

16364..16945
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJL6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49422.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_4_scaffold_69_13

Not on your lists

16942..17244
DNA (303bp) protein (101aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_4_scaffold_69_14
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17241..17663
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B219_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ01311.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
13_1_20cm_4_scaffold_69_15
Lawsonia intracellularis, Lawsonia, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17786..18484)
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG23_LAWIN
NA {ECO:0000313|EMBL:CAJ54140.1}; TaxID=363253 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Lawsonia.;" source="Lawsonia intracellularis (strain PHE
hypothetical protein
13_1_20cm_4_scaffold_69_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18557..19567)
DNA (1011bp) protein (337aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
dihydroorotate dehydrogenase (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D718_9BACT
13_1_20cm_4_scaffold_69_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19726..21069)
DNA (1344bp) protein (448aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sourc
tRNA modification GTPase MnmE n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D719_9BACT
tRNA modification GTPase TrmE
13_1_20cm_4_scaffold_69_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21246..22343)
DNA (1098bp) protein (366aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744961
histidinol-phosphate aminotransferase
13_1_20cm_4_scaffold_69_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22452..23633
DNA (1182bp) protein (394aa)
Cysteine desulfurase NifS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTM6_9BACT rbh
Cysteine desulfurase NifS {ECO:0000313|EMBL:EDY21880.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cysteine desulfurase NifS
13_1_20cm_4_scaffold_69_20
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23687..24337
DNA (651bp) protein (217aa)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae;
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQF1_ROSS1
13_1_20cm_4_scaffold_69_21
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

24476..24991
DNA (516bp) protein (172aa)
Appr-1-p processing domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGM7_AMICL
Appr-1-p processing domain protein {ECO:0000313|EMBL:ADE57709.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium co
Appr-1-p processing protein
13_1_20cm_4_scaffold_69_22
unknown

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25115..25615
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_4_scaffold_69_23
unknown

Not on your lists

comp(25700..25936)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_4_scaffold_69_24
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26191..27774)
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036F4F78
cytochrome c assembly protein Tax=GWF2_Verrucomicrobia_62_7_curated
cytochrome c assembly protein
13_1_20cm_4_scaffold_69_25
unknown

Not on your lists

comp(27789..27923)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_4_scaffold_69_26
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28163..28558
DNA (396bp) protein (132aa)
putative transcriptional regulator n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002890E41
AraC family transcriptional regulator {ECO:0000313|EMBL:KIL35084.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
Displaying 26 items

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