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13_1_20cm_4_scaffold_873

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_873_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
Integral membrane protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F848_SACEN
Integral membrane protein {ECO:0000313|EMBL:CAM00223.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
hypothetical protein
13_1_20cm_4_scaffold_873_2
Halobacillus sp. BBL2006, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(252..857)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD92_9BACT
Oxidoreductase {ECO:0000313|EMBL:KHE68287.1}; TaxID=1543706 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BBL2006.;"
hypothetical protein
13_1_20cm_4_scaffold_873_3
unknown

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comp(854..1243)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_4_scaffold_873_4
unknown

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1406..2143
DNA (738bp) protein (246aa)

This feature has no annotations

13_1_20cm_4_scaffold_873_5
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2224..2862
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=GWA2_Rhodocyclales_65_20_curated
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1T8_9BACT
13_1_20cm_4_scaffold_873_6
unknown

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comp(3012..3386)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_4_scaffold_873_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3448..4518
DNA (1071bp) protein (357aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BC18_9RHIZ
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AGK57680.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" so
mandelate racemase/muconate lactonizing protein
13_1_20cm_4_scaffold_873_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4720..5283)
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKM5_KORVE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABF42575.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
TetR family transcriptional regulator
13_1_20cm_4_scaffold_873_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5367..5849
DNA (483bp) protein (161aa)
NIPSNAP family containing protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0U3_ACISM
NIPSNAP family containing protein {ECO:0000313|EMBL:ADW70127.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (s
NIPSNAP family containing protein
13_1_20cm_4_scaffold_873_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5874..7118
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4V0G1_XANC8 rbh
Strain LMCP11 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28744.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;"
lipase/esterase
13_1_20cm_4_scaffold_873_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7172..7663)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW54_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_4_scaffold_873_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(7769..8524)
DNA (756bp) protein (252aa)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:ACB76146.1}; EC=1.14.19.1 {ECO:0000313|EMBL:ACB76146.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" so
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZX94_OPITP
13_1_20cm_4_scaffold_873_13
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(8937..9152)
DNA (216bp) protein (72aa)
translation initiation factor IF-1 n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036D538A
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methyla
translation initiation factor IF-1
13_1_20cm_4_scaffold_873_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9227..9529)
DNA (303bp) protein (101aa)
RNP-1 like RNA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK70_9BACT
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EEF59708.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sourc
RNP-1 like RNA-binding protein
13_1_20cm_4_scaffold_873_15
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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9950..10183
DNA (234bp) protein (78aa)
cfA; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Hypothetical cyclopropane-fatty-acyl-phospholipid synthase protein n=1 Tax=Photobacterium leiognathi subsp. mandapamensis svers.1.1. RepID=F2P7W2_PHOMO
Displaying 15 items

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