ggKbase home page

13_1_20cm_4_scaffold_1075_9

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(7658..8587)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 302.0
  • Bit_score: 274
  • Evalue 2.60e-70
Shikimate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 302.0
  • Bit_score: 274
  • Evalue 1.80e-70
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 303.0
  • Bit_score: 243
  • Evalue 7.50e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 930
ATGACAAAGCAAACCACCCAACGTTACACGGTCGCTGATCTTGAGAAATGGCATGATGTCGCGCGCGACATTGATCCCCCTATTCGCCTGGGCATTTTTGGTGATCCTGTTGCCCATTCGCTCTCTCCGGAGATGCAAAATGCCGCCCTGCGAGCCTGCGAGATTAACGCGCAATACGCACGTTTTCATATACGACCGAATGAATTGAGATCGGCTCTGCGCTTTTTGCGAAACTTGGATTTCGAGGGAGTGAACCTGACCGTGCCGCACAAAATCGCGGGGTTCGCGCAGATCGATGAGGCAGATGAATTTGCCAGCCGCGTGGGATCGGTGAACACGATTCGCCTTCGCGACAAGAAACTCGTTGGCTCGAATACTGACGGCGAGGGGTTCCTGCGCGCCATTCGCGCGGAATTCTCCGTCGATCTGCGCGATCTGCGAGTAATGTTAATTGGCGCCGGCGGCGGAACGGGACGCGCTATTGCGTGGCAATGCGCGCTTGAGAACTGCGAACGTCTCGTTCTCGTCAATCGCACACTGGAAAAAGCGGATGCGATCAGGGAGGGGTTGCGGCCATTTTTTATGGAACCTCGTGTGCTTGGCCCCGCAGCGCGCCTTGAAGCTATAGCGTGGGGGGAATCGGCAATACGCATGCAACTAGCAGACACGGATCTTATCGTTAACGCGACTCCCCTGGGGATGAATTCGAGCGATCCAACCCCGATCCCAGCCCGATTACTCGCACCGCATCACATGGTTTTCGATTGCGTATATGGACCATCCAAAACTGCTCTGCTTCACGCGGCCGAACAAGCCGGCGCGCGCAGCGCCAATGGAATATCGATGTTGCTGCATCAAGGTGCGCTCTCGTTTTCCTTCTGGTTCGATCGCGAGCCGCCGATCGACGCAATGAAGGCGGCGCTACTGTAA
PROTEIN sequence
Length: 310
MTKQTTQRYTVADLEKWHDVARDIDPPIRLGIFGDPVAHSLSPEMQNAALRACEINAQYARFHIRPNELRSALRFLRNLDFEGVNLTVPHKIAGFAQIDEADEFASRVGSVNTIRLRDKKLVGSNTDGEGFLRAIRAEFSVDLRDLRVMLIGAGGGTGRAIAWQCALENCERLVLVNRTLEKADAIREGLRPFFMEPRVLGPAARLEAIAWGESAIRMQLADTDLIVNATPLGMNSSDPTPIPARLLAPHHMVFDCVYGPSKTALLHAAEQAGARSANGISMLLHQGALSFSFWFDREPPIDAMKAALL*