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13_1_20cm_4_scaffold_1075_17

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 15737..16120

Top 3 Functional Annotations

Value Algorithm Source
efflux pump, RND family, inner membrane protein, AcrB/AcrD/AcrF family Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 128.0
  • Bit_score: 201
  • Evalue 8.80e-49
Efflux pump, RND family, inner membrane protein, AcrB/AcrD/AcrF family id=1734562 bin=GWB2_Desulfobacterales_56_26 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 126.0
  • Bit_score: 199
  • Evalue 2.40e-48
RND family efflux pump inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 128.0
  • Bit_score: 196
  • Evalue 3.30e-48

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Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGAAATCCTTCACTGACCTTTTTATCAAGCGCCCGGTGCTGGCGCTGGTGGTCAGCTTTGTGATCCTGATTGCCGGTTTGCAGGCGATGCGGACGATCAACGTGCGCCAGTATCCGCGCAGCGATATCGCGGCGATCACGATCACCACAGTTTATGTCGGCGCAGATGCGGAACTCGTTCGGGGTTTTATCACAACGCCTCTCGAGCGCGCGATCGCGGCGGCCGATGGAATCGATTATATCCAGTCGCAGAGCAAACAGGGGCAATCAGTCATCACTGTGCGCCTGAAACTGAACTACGACGCGAACAAAGCATTGTCCGATATCAGCTCGAAAGTTGATGCGATCCGCCGCGATTTACCTCCCGAATCTGAAATCCCTGTA
PROTEIN sequence
Length: 128
MKSFTDLFIKRPVLALVVSFVILIAGLQAMRTINVRQYPRSDIAAITITTVYVGADAELVRGFITTPLERAIAAADGIDYIQSQSKQGQSVITVRLKLNYDANKALSDISSKVDAIRRDLPPESEIPV