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13_1_20cm_4_scaffold_5293_8

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3613..4854

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB96_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 404.0
  • Bit_score: 624
  • Evalue 7.40e-176
  • rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY16284.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 404.0
  • Bit_score: 624
  • Evalue 1.00e-175
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 403.0
  • Bit_score: 442
  • Evalue 1.50e-121

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1242
ATGAGCGAATCAGCGACCCATGCAGCAATTGAAACCGTTGCGCGAGATTCATATGGGCGACTTATCGCCTACCTCGCGGCACGATCGGGCGACGTCGCCGGCGCGGAAGACGCGCTCGGCGACGCGTTCATCGCGGCATTGAAGCGGTGGCCAGCGGAAGGCGTTCCGGAAAAACCAGAAGCATGGCTGCTACATGTCGCGCGTAATCGAATGATTGACGCGGCTCGCCGAAAGCAAGTGCGGCAAAAATCTGAGACGTTTCTACAGCAAATCACGGAGGAAGCAGCGAGCGTCGCAGCAACACAAGAATATTTCCCCGACGAACGACTGAAACTTCTTTTCGTCTGCGCGCACCCGGCGATTGATCCCTCCGCTCAGACACCGTTGATGTTGCAAACAGTTCTTAGGGTTGATGCCGCACGAATTGCATCGGCGTTTCTCGTTTCGCCTGCAGCTATGAGCCAGCGGCTCGTTCGCGCGAAAAATAAAATTCGTGACGCCGGGATTCCTTTTCGTGTGCCGGAGCCGCCAGAGCTGGAAGAACGAGTTTCTTTTGTTCTCGATGCCATCTATGCCGCCTACACGACGGGTTGGGAAAGCCTGATGGAAACAGCTTCCACGCATCACGCGCTCGCGTCAGAGGCCATCGCGTTAGGACGAATGTTAACGCAGCTGATGCCGCGCGAACCCGAAGCTCACGGTTTACTTGCGCTGATGTTACACTGTGAAGCGCGACGTGAAGCACGTTACACAAGCCGCGGTGACTTTGTGCCGTTGGATCGGCAAGACACAGCTCTTTGGTCGCAATCGATGATTGACGAAGCCGAGACACATCTGCACTCGGCTGCCGCCTTCAAGCGCATGGGACGCTATCAATTGGAAGCTGCCATTCAATCTGTTCACGCTAATCGAGCGAAAACCGGGCACATCGATTGGAAGGAAATCGCTTTGCTCTACGAGGGCTTGGTGCGAATCGCGCCCAGGATTGGTTCGCTTGTTGGGCGAGCCGTTGCGATTGCGCAAACAGGCGAGCCGGCTGTCGGATTGGCCGCTCTTGACGGCATTCCCTCGGAGCAGACGGCGGATTATCAGCCCTATTGGGCGGCGCGCGGCCATCTGCTTCGCTTGCTGAATCGGAACGATGAAGCGGTCGAAGCGTTCAATCGTGCCGCGAGCCTGACAGACGATCCGGCGTTGCGTGAATACCTTTTGCAACGCTCCACCACCAGTACGTTTGGATGA
PROTEIN sequence
Length: 414
MSESATHAAIETVARDSYGRLIAYLAARSGDVAGAEDALGDAFIAALKRWPAEGVPEKPEAWLLHVARNRMIDAARRKQVRQKSETFLQQITEEAASVAATQEYFPDERLKLLFVCAHPAIDPSAQTPLMLQTVLRVDAARIASAFLVSPAAMSQRLVRAKNKIRDAGIPFRVPEPPELEERVSFVLDAIYAAYTTGWESLMETASTHHALASEAIALGRMLTQLMPREPEAHGLLALMLHCEARREARYTSRGDFVPLDRQDTALWSQSMIDEAETHLHSAAAFKRMGRYQLEAAIQSVHANRAKTGHIDWKEIALLYEGLVRIAPRIGSLVGRAVAIAQTGEPAVGLAALDGIPSEQTADYQPYWAARGHLLRLLNRNDEAVEAFNRAASLTDDPALREYLLQRSTTSTFG*