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13_1_20cm_4_scaffold_5566_9

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(8072..8308)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MatE n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037DA6D2 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 83.0
  • Bit_score: 65
  • Evalue 2.50e-08
Multidrug transporter MatE {ECO:0000313|EMBL:KJC52869.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 79.0
  • Bit_score: 65
  • Evalue 4.60e-08
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 83.0
  • Bit_score: 64
  • Evalue 2.10e-08

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
TTGCCACCGCTAATTAGCTCGATGACGCGGTTGGTTCTTTTTGCCTTGCCCGCTTATTTGGTTTCGCTCCATCCCGGATTTCAAATCAGGCACGTCTGGTATCTCTCGGTTGGCTCGATCGTTTTCCAGGCCTGCCTCAATCTCCTGCTGCTGCGCCGCGAGTTGCAACGCAAGCTAGTCTTTCCTCAGAACTTCCCGGAGGGAATTGCCGAACCGGGTGGCGCGGTCGCCAGCTAG
PROTEIN sequence
Length: 79
LPPLISSMTRLVLFALPAYLVSLHPGFQIRHVWYLSVGSIVFQACLNLLLLRRELQRKLVFPQNFPEGIAEPGGAVAS*