ggKbase home page

13_1_20cm_4_scaffold_580_16

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 15990..19199

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD44_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 999.99
  • Bit_score: 658
  • Evalue 9.20e-186
  • rbh
TPR repeat-containing protein {ECO:0000313|EMBL:EEF62390.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pe UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 999.99
  • Bit_score: 658
  • Evalue 1.30e-185
lipoprotein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 730.0
  • Bit_score: 272
  • Evalue 5.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3210
ATGTTATTTAGAATCGTAACGCTTACTCTAGCGGCTGCACTCATCGCCTCCTGCTCTAAGGAAGCCAAGAAGACACGGTTTCTCGCGGAGGCGGACTCTTATTTTAAAGCCGGCAATTACGACAAGGCAAAGGTAAGCTACCTCAACGTGGTGCGGCTAGACCCGCAAAACGCGCTCGCCTTCGAAAGAATTGGAACCATGTGGCTGGAGGATGGATCACCGCTGCGTGCCGCTGCGTTCCTTGTGAAGGCGAACGAGCTGGCTCCCAAGAACGATCAAAATCGAATACGGCTCACCCGATGTTATCTGGCCATAGGGCGCTTCGCCGATGCAAGCAAACAAGCCCTTAAGGTGCTGGAGCAGACCCCAGACAATGAAGACGCGATTATCGCTTTGACTGAAGCGGCGCGAAGCAAGGAAGACATTCAGGCCGCGGAGCAACATCTCGAGAAATACCCTAAAAAGGACGACATTTCTTTTCACCTCGCTTCGGCGAATCTGTTTCTCAGCAGTGGCGACTTAGCTGCGGCAGAAAAAGCCCTGCGGCCAGCGCTTACCGTCAATCCTAATTCTTCCGCCGCGCACATGGCGCTGGGAGATCTCTATCTGCTCAAGAAAGACCAGAAACAAGCCGGCGAAGAATTCAAAAAAGCAGCGGAGCTTGCGCCTGTTCGTTCCATGGAGCGCTTGAAATATGCAGCGTTCATGTCCGCGGCAGGTGATACCGCAGAAACAAGAAGAATTTCGACTGAGATGACCACACAGGCACCCGACTATCTGCCAGGCTGGACTTTGCTAGCCGAGCTTGCCTTTAAGGAAGGTAAATATGACGAGGCTCTCTCGCTTCTTGAAAATGTTTTTAGCCGCGAGCCGCAATACATAGATGGCCACAGACTGGAAAGCGAGGTACTGCTAGCAAAGGGCGACACGAAAAAAGCTACCGAGGTTTTAGAAAGGCTCGACCAAACCTATCCGGACACTCCTCTTATCAAGTACGAACTGGCACGTGCTTATCTCAAAAAGAATAACATGAACCAGGCAAAGGTAGTGTTGGATCAGGCCATCTCAATTAACCCGAACTACGCCGAAGCCATACTGCTTCTTGCCGACATCAATCTTCGTTCTGGCCATGGCGAAGCTGTTATTGAACCGATGACGCGTTTGCTGAAGAGGTCTCCCGAGTTAAGGTCTGCGGCATTGCTCTTGGCCGCTGCATATGGCTCGCTTGATCGCTTTGACGATGCCGCTGTAGTCACCGGCGAGGAAGCAAAGCTTGCACCGCGCGATCCACAAGCGCAGATGGCATTAGGCCTGACCTTACGTCAAGCCAAGAGAAATGACGAAGCACGCCAGGCATTTGAAAAAGCCGCCGAGCTCGCGCCAGATAACTTGTGGCCAGTCGATCAACTCGTGGAACTGGACTTGCTGGAAAAGCATTTTGATACTGCGCAGCAGAGGATAGATCGTCACTTCCAAAAGACACCTGATTCGCCAGCAGCCCATTTTTTCAAGGGGAAGATCCTGGTAGCGGAAGAAAAATGGGGTCCAGCCGAGACAGAGCTCCAAAAGACACTCCAACTCGACCCAAATTTTGGCGGCGCATACGATTTGCTGGTCCAAACTTATCTTGTGACCAACAAGCTTCCCCAAGCGCTCAGTCAATTGCAGACCCAGCTTTCGAAAAATCCTAATGATGCATCAGCGCTTATGACACTCGCGCTCCTGCACGAGCGGACAAACGAGTTCGCTAAAGCACGCGATGCTTACGAGCACCTTCTCTCGTTGAAACCTGACTTAGTTTCAGCTCTGAATAATCTTGCTTGCCTCTATGCCGATCGACTGAATGATCTAGGCAAGGCTTACGATCTGGCGCGCAAAGCCCGCGACCTCCAGGGAAACGATCCCGCAATAGCTGACACGTTTGGCTGGATTTTGTCCAAGCGCGGCGAGTATCAACAAGCCCTGGCGATTCTGCAAGGGAGCGCAGCAAAGTTACCCGATAGTCCGGAAGTCCAATTCCACCTTGGCATGACGGCTTATATGATGGGTCAGCCAGACTTAGCCAGGGTGGCTCTCCAAAAAGCCGCGAGCGCGACCAACGATTTTCCCGGCAAGGAGGAAAGCAAACGTCATCTCGCTTTGCTAAAAAACGATGCCGCCGCTGCGCCAGAATTGTCGGTTTCACAGCTGGAAGCAATGGCGAAAAAGCAACCTAACGACGTCATCGCTCAGACGCGTTTGGGTGAGGCTTATGAGAAACAAGGCGCAGCGGATAAAGCGGCCGCGGCTTTCGAGCAGGTACTAAAACTAAATCCTCGGTTGGCTTCGGCGACAACCAAACTCGCGCAACTCTATGCCGGGCCCCTTCAGAATAAGGAGAAAGCTCTCGCCTACGCAAAAAAAGCGCGCGAACTGACGCCGAATGATCCCCAGGTCACCAGCATTCTCGGAAAGGTTGCCTACCAAAGTGGCAATCTCGCTTGGTCGTACAGCCTTCTGCAGGAGGCAGCACGACAGCGCGAAAACGATCCGTCGATCCTCCACGATTTGGCTTGGGCTGCTTATAGATTGGGAAAAGTGAATGAGGCTCGTGAAACCATGCAAAAAGCTCTGGCGACCGGTTCCGACTTCCCGGAAGCTGCTGACGCTAGAACATTTCTTTCGTTAACTGCATTGGATGAAAACTTAAAGGAACTCGTGGCGGCGGAGAACGAGATCCAAAAGGAATTGCAAGCAAGTCCTGAGTATCTGCCCGCCCTCATGGCCCAGGCCGCCCTCGATGAACAGCGCGGTCAGATAAAGCCGGCATCTGAGATATACACGAGCATCCTTCGTCGATCACCGGATTTCGCGCCTGCGCAAAAACGCCTGGCCAAACTGTATGCGCAAGAGCCATCCACAACTGCTGCGGCGTACGACCTTGCCACAAAAGCGCGTAAGGCATTACCAGATGACGGCGAATTGGCGGAACTTCTTGGACGATTGAGCTATGAGAAAAAGGAATACCAGCGCGCAATCCAATTATTGGAGGAAAGCGCTCGGAAAACATCGCTCAACGCCAATTCTCTTTTCTATCTGGGAATGTCTCAACTTCAGACCAGACAAAAAGCCGAAGCACGCGACGTCCTTAATCAAGCCTTGGTTGGCGGTCTTCAGGAGCCTCTGGCATCCGAAGCAAGGCATGCCCTCGCAGATCTGCAGCCAAAGTAA
PROTEIN sequence
Length: 1070
MLFRIVTLTLAAALIASCSKEAKKTRFLAEADSYFKAGNYDKAKVSYLNVVRLDPQNALAFERIGTMWLEDGSPLRAAAFLVKANELAPKNDQNRIRLTRCYLAIGRFADASKQALKVLEQTPDNEDAIIALTEAARSKEDIQAAEQHLEKYPKKDDISFHLASANLFLSSGDLAAAEKALRPALTVNPNSSAAHMALGDLYLLKKDQKQAGEEFKKAAELAPVRSMERLKYAAFMSAAGDTAETRRISTEMTTQAPDYLPGWTLLAELAFKEGKYDEALSLLENVFSREPQYIDGHRLESEVLLAKGDTKKATEVLERLDQTYPDTPLIKYELARAYLKKNNMNQAKVVLDQAISINPNYAEAILLLADINLRSGHGEAVIEPMTRLLKRSPELRSAALLLAAAYGSLDRFDDAAVVTGEEAKLAPRDPQAQMALGLTLRQAKRNDEARQAFEKAAELAPDNLWPVDQLVELDLLEKHFDTAQQRIDRHFQKTPDSPAAHFFKGKILVAEEKWGPAETELQKTLQLDPNFGGAYDLLVQTYLVTNKLPQALSQLQTQLSKNPNDASALMTLALLHERTNEFAKARDAYEHLLSLKPDLVSALNNLACLYADRLNDLGKAYDLARKARDLQGNDPAIADTFGWILSKRGEYQQALAILQGSAAKLPDSPEVQFHLGMTAYMMGQPDLARVALQKAASATNDFPGKEESKRHLALLKNDAAAAPELSVSQLEAMAKKQPNDVIAQTRLGEAYEKQGAADKAAAAFEQVLKLNPRLASATTKLAQLYAGPLQNKEKALAYAKKARELTPNDPQVTSILGKVAYQSGNLAWSYSLLQEAARQRENDPSILHDLAWAAYRLGKVNEARETMQKALATGSDFPEAADARTFLSLTALDENLKELVAAENEIQKELQASPEYLPALMAQAALDEQRGQIKPASEIYTSILRRSPDFAPAQKRLAKLYAQEPSTTAAAYDLATKARKALPDDGELAELLGRLSYEKKEYQRAIQLLEESARKTSLNANSLFYLGMSQLQTRQKAEARDVLNQALVGGLQEPLASEARHALADLQPK*