ggKbase home page

13_1_20cm_4_scaffold_580

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_580_1

Not on your lists

3..1007
DNA (1005bp) protein (335aa)
GH12 cellulase-like protein n=1 Tax=uncultured bacterium RepID=H9BVK4_9BACT
GH12 cellulase-like protein {ECO:0000313|EMBL:AFD36891.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alpha amylase
13_1_20cm_4_scaffold_580_2
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1041..2387
DNA (1347bp) protein (449aa)
Methyltransferase family protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R507_9CYAN rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:EKE98377.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
methyltransferase family protein
13_1_20cm_4_scaffold_580_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2387..2920
DNA (534bp) protein (178aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Beggiatoa sp. PS RepID=A7BPY5_9GAMM
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_20cm_4_scaffold_580_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2920..4269
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000346F519 rbh
Peptidase M28 {ECO:0000313|EMBL:KIJ79326.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
13_1_20cm_4_scaffold_580_5
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4266..4985
DNA (720bp) protein (240aa)
Similar to short chain oxidoreductase or oxoacyl carrier reductase {ECO:0000313|EMBL:CAJ73343.1}; EC=1.1.1.236 {ECO:0000313|EMBL:CAJ73343.1};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomy
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Similar to short chain oxidoreductase or oxoacyl carrier reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6Z7_9BACT
13_1_20cm_4_scaffold_580_6
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5033..5827
DNA (795bp) protein (265aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034CD386
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KIJ84455.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB
13_1_20cm_4_scaffold_580_7
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5824..6477
DNA (654bp) protein (218aa)
Putative LmbE-like protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R616_9CYAN
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:KIJ81243.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
putative LmbE-like protein
13_1_20cm_4_scaffold_580_8
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6523..7725
DNA (1203bp) protein (401aa)
FAD dependent oxidoreductase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XFH4_9CHRO rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AFZ31375.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_580_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7888..9174
DNA (1287bp) protein (429aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EEF62387.1}; EC=1.1.1.22 {ECO:0000313|EMBL:EEF62387.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verruco
Nucleotide sugar dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD41_9BACT rbh
UDP-N-acetyl-D-glucosamine dehydrogenase
13_1_20cm_4_scaffold_580_10
unknown

Not on your lists

comp(9070..9339)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_4_scaffold_580_11
unknown

Not on your lists

9359..9661
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_4_scaffold_580_12
Verrucomicrobia, Bacteria

Not on your lists

9904..11148
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00037C3167
13_1_20cm_4_scaffold_580_13

Not on your lists

11244..12203
DNA (960bp) protein (320aa)
Eight transmembrane protein EpsH n=1 Tax=uncultured bacterium 'To-T 020 P12' RepID=K9NBD2_9BACT
Eight transmembrane protein EpsH {ECO:0000313|EMBL:AFY17079.1}; TaxID=1263626 species="Bacteria; environmental samples.;" source="uncultured bacterium 'To-T 020 P12'.;"
hypothetical protein
13_1_20cm_4_scaffold_580_14

Not on your lists

12462..14579
DNA (2118bp) protein (706aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263626 species="Bacteria; environmental samples.;" source="uncultured bacterium 'To-T 020 P12'.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=uncultured bacterium 'To-T 020 P12' RepID=K9NCZ5_9BACT
hypothetical protein
13_1_20cm_4_scaffold_580_15

Not on your lists

14576..15961
DNA (1386bp) protein (462aa)
Two component sigma54 specific transcriptional regulator n=1 Tax=uncultured bacterium 'To-T 020 P12' RepID=K9NAP1_9BACT rbh
Two component sigma54 specific transcriptional regulator {ECO:0000313|EMBL:AFY17081.1}; TaxID=1263626 species="Bacteria; environmental samples.;" source="uncultured bacterium 'To-T 020 P12'.;"
Fis family transcriptional regulator
13_1_20cm_4_scaffold_580_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15990..19199
DNA (3210bp) protein (1070aa)
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD44_9BACT rbh
TPR repeat-containing protein {ECO:0000313|EMBL:EEF62390.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pe
lipoprotein
13_1_20cm_4_scaffold_580_17
unknown

Not on your lists

19584..20141
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_20cm_4_scaffold_580_18
unknown

Not on your lists

comp(21172..21306)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 18 items

View Taxonomy