ggKbase home page

13_1_20cm_4_scaffold_4917

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4917_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

54..1232
-----------------
DNA (1179bp)
protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Sporichthya polymorpha RepID=UPI0003726B31
13_1_20cm_4_scaffold_4917_2
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

1229..3154
-----------------
DNA (1926bp)
protein (642aa)
Peptidase S9A/B/C family, catalytic domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUG0_9BACT
Peptidase S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:BAL60160.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicu
dipeptidyl aminopeptidase/acylaminoacyl peptidase
13_1_20cm_4_scaffold_4917_trna_1
unknown

Not on your lists

3175..3257
-----------------
DNA (83bp)
transferRNA
13_1_20cm_4_scaffold_4917_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3373..4374
-----------------
DNA (1002bp)
protein (334aa)
Serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003AC96E0
Uncharacterized protein {ECO:0000313|EMBL:EQL44797.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
13_1_20cm_4_scaffold_4917_4
unknown

Not on your lists

comp(4394..5572)
-----------------
DNA (1179bp)
protein (393aa)

This feature has no annotations

13_1_20cm_4_scaffold_4917_5
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5733..7169)
-----------------
DNA (1437bp)
protein (479aa)
hypothetical protein Tax=GWB2_Elusimicrobia_63_22_curated
Putative uncharacterized protein id=1829970 bin=GWB2_Elusimicrobium_63_22 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
13_1_20cm_4_scaffold_4917_trna_2
unknown

Not on your lists

7705..7787
-----------------
DNA (83bp)
transferRNA
13_1_20cm_4_scaffold_4917_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7870..8865)
-----------------
DNA (996bp)
protein (332aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYB0_BEUC1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_4_scaffold_4917_7
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

comp(8871..9536)
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ABK6_9BACT
hypothetical protein Tax=RBG_13_OP11_40_7b_curated
hypothetical protein
13_1_20cm_4_scaffold_4917_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

9568..11406
-----------------
DNA (1839bp)
protein (613aa)
GTP-binding protein TypA n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIJ3_9CHLR rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EFH89250.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter race
typA; GTP-binding protein
13_1_20cm_4_scaffold_4917_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

11523..11720
-----------------
DNA (198bp)
protein (66aa)
cspC_[H]; cold-shock DNA-binding domain protein Tax=GWC2_RIF_CHLX_73_18_curated
Cold-shock domain family protein id=4718003 bin=GWC2_Chloroflexi_73_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cold-shock DNA-binding protein family
13_1_20cm_4_scaffold_4917_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

11907..12104
-----------------
DNA (198bp)
protein (66aa)
cspC_[H]; cold-shock DNA-binding domain protein Tax=GWC2_RIF_CHLX_73_18_curated
Cold-shock domain family protein id=4718003 bin=GWC2_Chloroflexi_73_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cold-shock DNA-binding protein family
13_1_20cm_4_scaffold_4917_11
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12275..13063)
-----------------
DNA (789bp)
protein (263aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EEE6_9FIRM
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCO07161.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoco
branched-chain amino acid ABC transporter ATP-binding protein
Displaying 13 items

View Taxonomy