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13_1_20cm_4_scaffold_526

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_526_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3..518
DNA (516bp) protein (172aa)
Putative metal-dependent membrane protease n=1 Tax=Gordonia terrae C-6 RepID=R7Y9S9_9ACTO
putative protease of the Abi (CAAX) family Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative metal-dependent membrane protease
13_1_20cm_4_scaffold_526_trna_1
unknown

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comp(761..833)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_526_2
unknown

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comp(972..1796)
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_20cm_4_scaffold_526_3
unknown

Not on your lists

comp(1905..2630)
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_20cm_4_scaffold_526_4
unknown

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comp(2674..3078)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_4_scaffold_526_5
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3630..4466
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037F110C
alpha/beta hydrolase fold protein
Tax=BJP_IG2069_Spirochaetales_48_31
13_1_20cm_4_scaffold_526_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4463..4762
DNA (300bp) protein (100aa)
Transglycosylase-associated protein n=1 Tax=Ktedonobacter racemifer DSM 44963 PF3_9CHLR">RepID=D6TPF3_9CHLR
Transglycosylase-associated protein {ECO:0000313|EMBL:EFH85567.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
transglycosylase
13_1_20cm_4_scaffold_526_7
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4778..6403)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MDA2_9ACTO
Drug resistance transporter {ECO:0000313|EMBL:CCH31274.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (s
Drug resistance transporter
13_1_20cm_4_scaffold_526_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6384..7010)
DNA (627bp) protein (209aa)
Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASK5_RUBXD
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABG05623.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacterac
PadR family transcriptional regulator
13_1_20cm_4_scaffold_526_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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7176..7730
DNA (555bp) protein (185aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KL8_SYMTH
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Chloroflexi_68_17_curated
RNA polymerase ECF-type sigma factor
13_1_20cm_4_scaffold_526_10
unknown

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7727..8269
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_20cm_4_scaffold_526_11
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

8262..9044
DNA (783bp) protein (261aa)
hypothetical protein Tax=RBG_13_Chloroflexi_66_10_curated
Hypothetical membrane protein id=3925309 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_20cm_4_scaffold_526_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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9083..10735
DNA (1653bp) protein (551aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUW2_ACIC1
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABK53222.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="A
RND family efflux transporter MFP subunit
13_1_20cm_4_scaffold_526_13
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

10732..11409
DNA (678bp) protein (226aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3Z1_CALAS
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Chloroflexi_57_9_curated
putative ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_526_14
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

11406..12653
DNA (1248bp) protein (416aa)
Permease family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FLZ8_9FIRM
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_13_Chloroflexi_66_10_curated
antimicrobial peptide ABC transporter permease
13_1_20cm_4_scaffold_526_15
R_OD1_Kaiserbacteria_53_29, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

12666..13160
DNA (495bp) protein (165aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_29_curated
13_1_20cm_4_scaffold_526_16
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13157..13678)
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VSJ6_MARMS
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABR69425.1}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strain M
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_526_17
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13702..14067
DNA (366bp) protein (122aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] id=24411075 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Dihydroneopterin aldolase FolB {ECO:0000313|EMBL:ACC43514.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strai
folB; dihydroneopterin aldolase FolB
13_1_20cm_4_scaffold_526_18
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14064..15218
DNA (1155bp) protein (385aa)
UPF0272 protein Rcas_1165 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=Y1165_ROSCS
UPF0272 protein Rcas_1165 {ECO:0000255|HAMAP-Rule:MF_01074}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflex
hypothetical protein
13_1_20cm_4_scaffold_526_19
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

15215..16066
DNA (852bp) protein (284aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Bifunctional protein folD
Bifunctional protein FolD id=2801747 bin=GWF2_Planctomycete_41_51 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
13_1_20cm_4_scaffold_526_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16063..16665)
DNA (603bp) protein (201aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein id=1247465 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_20cm_4_scaffold_526_21
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16690..17955
DNA (1266bp) protein (422aa)
FolC bifunctional protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXI2_TRURR
FolC bifunctional protein {ECO:0000313|EMBL:ADI14584.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_20cm_4_scaffold_526_22
unknown

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comp(17945..18334)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_4_scaffold_526_23
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18335..19117)
DNA (783bp) protein (261aa)
dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029B3861
short-chain dehydrogenase Tax=RBG_16_Gamma2_60_9_curated
oxidoreductase
13_1_20cm_4_scaffold_526_24
unknown

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comp(19267..19341)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 25 items

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