ggKbase home page

13_1_20cm_4_scaffold_8543_1

Organism: 13_1_20CM_4_Chloroflexi_66_7

partial RP 16 / 55 BSCG 18 / 51 ASCG 3 / 38
Location: 3..548

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM48 RepID=J2S9X2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 173.0
  • Bit_score: 277
  • Evalue 9.80e-72
Transcriptional regulator {ECO:0000313|EMBL:EJM58449.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 173.0
  • Bit_score: 277
  • Evalue 1.40e-71
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 174.0
  • Bit_score: 252
  • Evalue 9.50e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. GM48 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
CACCACGTCGAGGTTACGATCTCCAGCAACTATTCCCCGGACCTCGCCGATGCGCTCGCTCGTGGCAGGCTCGACGTGGCCTTTCTCCGTGTCGAACCGCACCTCGATCTGGAATACCGGGTGGTGACCCAGGAGCCGCTCGTGGTGCTGATGCCGAGCGACCATCGCTTGACGGCGCGCGAGTCAATCCGTCCGCAGGAGATCGTCGGCGAGATCTTCATCGGCGCGTCGAACAAGGCCACCGTGTTGCGCGGCGTCATCGAAAACTATTTGAAGCGCTCGGGCGTCGATATCAAACCCGATCACGGGGTGGATAATCTCGCCATGGCGATATCCCTGGTCGCTTCCACGCGCGGGCTGTCGCTGATGCCCGCCTATGCAAAAAACCTGCTGCCCTGGTCTGTCGTCAGCCGCCCGCTGGAAGGCGATGTGCCGACAATCGATCTCGCTATCGGCTACAGCAAGGCGAACACATCGCCGACCTTGAAGCTGTTCCTTTCGCGGGTGGACGAGTTGATCGCCCGCGGGGCGCAAAAAGCCCACTGA
PROTEIN sequence
Length: 182
HHVEVTISSNYSPDLADALARGRLDVAFLRVEPHLDLEYRVVTQEPLVVLMPSDHRLTARESIRPQEIVGEIFIGASNKATVLRGVIENYLKRSGVDIKPDHGVDNLAMAISLVASTRGLSLMPAYAKNLLPWSVVSRPLEGDVPTIDLAIGYSKANTSPTLKLFLSRVDELIARGAQKAH*