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13_1_20cm_4_scaffold_8543

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_8543_1
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..548
DNA (546bp) protein (182aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM48 RepID=J2S9X2_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM58449.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
LysR family transcriptional regulator
13_1_20cm_4_scaffold_8543_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(649..1647)
DNA (999bp) protein (333aa)
Group 1 glycosyl transferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIA0_CORCM
Group 1 glycosyl transferase {ECO:0000313|EMBL:AFE06636.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source
group 1 glycosyl transferase
13_1_20cm_4_scaffold_8543_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1737..3710
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5Y883_9PROT
Sigma-24 protein {ECO:0000313|EMBL:EYF06400.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces ap
RNA polymerase sigma70 factor
13_1_20cm_4_scaffold_8543_4
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3707..4375
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA91939.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_20cm_4_scaffold_8543_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4372..5925
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PBB8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA91940.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
ICE-like protease
13_1_20cm_4_scaffold_8543_6
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6201..6872)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z0E0_DESAF
Uncharacterized protein {ECO:0000313|EMBL:EGJ50950.1}; Flags: Precursor;; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;"
hypothetical protein
13_1_20cm_4_scaffold_8543_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6869..7837)
DNA (969bp) protein (323aa)
Mammalian cell entry related domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQZ7_9BACT
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EEF57774.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia sub
cell entry protein
13_1_20cm_4_scaffold_8543_8
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(7834..8619)
DNA (786bp) protein (262aa)
ABC transporter related n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0REI3_9DELT
ABC transporter ATP-binding component {ECO:0000313|EMBL:KHE90463.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalind
ABC transporter related
13_1_20cm_4_scaffold_8543_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8616..9779)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000364FD84
Uncharacterized protein {ECO:0000313|EMBL:EEF57772.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
sulfate ABC transporter permease
13_1_20cm_4_scaffold_8543_10
unknown

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10109..10324
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_4_scaffold_8543_11
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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10416..11237
DNA (822bp) protein (274aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWW2_HERA2
short-chain dehydrogenase/reductase SDR
Tax=BJP_08E140C01_Coriobacteriales_62_12
13_1_20cm_4_scaffold_8543_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11262..11552)
DNA (291bp) protein (97aa)
Alpha/beta hydrolase fold-1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK44_ANADE
Alpha/beta hydrolase fold-1 {ECO:0000313|EMBL:ABC82021.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae
alpha/beta hydrolase fold protein
Displaying 12 items

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