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13_1_20cm_4_scaffold_2140

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2140_1
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(2..817)
DNA (816bp) protein (272aa)
transposase, IS605 OrfB family Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
13_1_20cm_4_scaffold_2140_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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865..2529
DNA (1665bp) protein (555aa)
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_16_Euryarchaeota_67_27_curated
phP C-terminal domain-containing protein id=14631834 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
PHP domain-containing protein
13_1_20cm_4_scaffold_2140_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2458..3489)
DNA (1032bp) protein (344aa)
hypothetical protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Phage SPO1 DNA polymerase-related protein n=1 Tax=uncultured prokaryote RepID=H5SI33_9ZZZZ
uracil DNA glycosylase superfamily protein
13_1_20cm_4_scaffold_2140_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3796..4224)
DNA (429bp) protein (143aa)
Heat shock protein Hsp20 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1U3_FERPA
small heat shock protein Tax=RBG_16_Euryarchaeota_67_27_curated
small heat shock protein (hsp20-1)
13_1_20cm_4_scaffold_2140_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(4268..4672)
DNA (405bp) protein (135aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_2140_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4732..5568
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003724D8B
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_2140_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5610..6290
DNA (681bp) protein (227aa)
Probable RNA 2'-phosphotransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8F6_9EURY
RNA 2'-phosphotransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA 2'-phosphotransferase
13_1_20cm_4_scaffold_2140_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6385..7065
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMJ7_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_2140_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6980..7984)
DNA (1005bp) protein (335aa)
calcium-sodium antiporter; K07301 inner membrane protein Tax=RBG_16_Euryarchaeota_67_27_curated
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein id=5084639 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
calcium-sodium antiporter
13_1_20cm_4_scaffold_2140_10
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8111..8548
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TWW5_9MICC
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KHL12102.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
13_1_20cm_4_scaffold_2140_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8562..9749)
DNA (1188bp) protein (396aa)
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS0_METBF
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
13_1_20cm_4_scaffold_2140_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9836..11464
DNA (1629bp) protein (543aa)
alkylglycerone-phosphate synthase (EC:2.5.1.26); K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
alkylglycerone-phosphate synthase (EC:2.5.1.26)
Alkylglycerone-phosphate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI0_CONWI
13_1_20cm_4_scaffold_2140_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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11461..13071
DNA (1611bp) protein (537aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Glycerol-3-phosphate dehydrogenase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S2V4_9DELT
glycerol-3-phosphate dehydrogenase
13_1_20cm_4_scaffold_2140_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13061..13987
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D7X8_DESAJ
diacylglycerol kinase; K07029 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
conserved protein of unknown function BmrU
13_1_20cm_4_scaffold_2140_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14089..15498)
DNA (1410bp) protein (470aa)
lysyl-tRNA synthetase; K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=RBG_16_Euryarchaeota_67_27_curated
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RYA8_THEPD
13_1_20cm_4_scaffold_2140_16
unknown

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comp(15638..15877)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_4_scaffold_2140_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15946..16539)
DNA (594bp) protein (198aa)
phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Orotate phosphoribosyltransferase-like enzyme n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNK8_ACIS0
orotate phosphoribosyltransferase-like enzyme
13_1_20cm_4_scaffold_2140_18
unknown

Not on your lists

comp(16650..16886)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_4_scaffold_2140_19
unknown

Not on your lists

comp(16897..17211)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_4_scaffold_2140_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17150..17926)
DNA (777bp) protein (259aa)
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8E7_METFA
dihydroorotate dehydrogenase electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RBG_16_Euryarchaeota_67_27_curated
dihydroorotate dehydrogenase electron transfer subunit
13_1_20cm_4_scaffold_2140_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17919..18827)
DNA (909bp) protein (303aa)
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dihydroorotate dehydrogenase family protein (EC:1.3.3.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D774F
13_1_20cm_4_scaffold_2140_22
unknown

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18983..19102
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 22 items

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