ggKbase home page

13_1_20cm_4_scaffold_2298

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2298_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1..768
DNA (768bp) protein (256aa)
L-threonine 3-dehydrogenase; K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=RBG_16_Euryarchaeota_68_12_curated
L-threonine 3-dehydrogenase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9E1_9EURY
L-threonine 3-dehydrogenase
13_1_20cm_4_scaffold_2298_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

952..1818
DNA (867bp) protein (289aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T811_9EURY
13_1_20cm_4_scaffold_2298_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1815..2246)
DNA (432bp) protein (144aa)
ypeA; Acetyltransferase (EC:2.3.1.-) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVQ2_9BACT
hypothetical protein
13_1_20cm_4_scaffold_2298_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2251..2742)
DNA (492bp) protein (164aa)
Putative hydrolase, NUDIX family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE69_VARPD
NUDIX hydrolase Tax=RBG_16_Euryarchaeota_67_27_curated
putative hydrolase, NUDIX family
13_1_20cm_4_scaffold_2298_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2726..3061)
DNA (336bp) protein (112aa)
export-related chaperone CsaA; K06878 tRNA-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
export-related chaperone CsaA; K06878 tRNA-binding protein id=14631445 bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
export-related chaperone CsaA
13_1_20cm_4_scaffold_2298_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3127..3627)
DNA (501bp) protein (167aa)
id=4400131 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
id=4400131 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_20cm_4_scaffold_2298_7
unknown

Not on your lists

comp(3696..4055)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_4_scaffold_2298_8
unknown

Not on your lists

comp(4061..4717)
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_20cm_4_scaffold_2298_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4872..5498
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BA64_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF85062.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
hypothetical protein
13_1_20cm_4_scaffold_2298_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5554..8046)
DNA (2493bp) protein (831aa)
M1 family peptidase; K01256 aminopeptidase N [EC:3.4.11.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Membrane alanyl aminopeptidase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFJ3_9BACT
M1 family peptidase
Displaying 10 items

View Taxonomy