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13_1_20cm_4_scaffold_2348

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2348_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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105..1199
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003778FC2
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_1_20cm_4_scaffold_2348_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1328..2434
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA rbh
cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_1_20cm_4_scaffold_2348_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2439..2690
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380AC36
secE; preprotein translocase subunit SecE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
secE; preprotein translocase subunit SecE
13_1_20cm_4_scaffold_2348_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2695..3621
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_67_27_curated
Putative transcription antitermination protein NusG
13_1_20cm_4_scaffold_2348_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3836..4315
DNA (480bp) protein (160aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Euryarchaeota_68_13_curated
50S ribosomal protein L11
13_1_20cm_4_scaffold_2348_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(4318..5136)
DNA (819bp) protein (273aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator, TrmB-like
13_1_20cm_4_scaffold_2348_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5391..6029
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
LSU ribosomal protein L10Ae (L1p) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L1
13_1_20cm_4_scaffold_2348_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


6039..6920
DNA (882bp) protein (294aa)
50S ribosomal protein L10 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V4_9EURY rbh
rplP0; acidic ribosomal protein P0 Tax=RBG_16_Euryarchaeota_67_27_curated
rplP0; acidic ribosomal protein P0
13_1_20cm_4_scaffold_2348_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6946..7254
DNA (309bp) protein (103aa)
50S ribosomal protein L12 n=2 Tax=unclassified Thermoplasmatales RepID=M7T3Z7_9EURY
50S ribosomal protein L12P; K02869 large subunit ribosomal protein L12 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl12p; 50S ribosomal protein L12
13_1_20cm_4_scaffold_2348_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7251..7496)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXD6_FERPA
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_2348_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(7536..7988)
DNA (453bp) protein (151aa)
Radical SAM domain protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T952_ACIB4
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_68_13_curated
Radical SAM domain protein
13_1_20cm_4_scaffold_2348_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8446..9672)
DNA (1227bp) protein (409aa)
Pc22g03720 Tax=RBG_16_Euryarchaeota_68_13_curated
similar to CG16995 CG16995-PA
13_1_20cm_4_scaffold_2348_trna_1
unknown

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10043..10115
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_2348_13
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

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comp(10163..11554)
DNA (1392bp) protein (464aa)
amidase Tax=MPI_Marinimicrobia_46_47
Surface layer protein id=4586873 bin=GWF2_Bacteroidetes_49_14 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
PDK repeat-containing protein
13_1_20cm_4_scaffold_2348_14
unknown

Not on your lists

comp(11551..12198)
DNA (648bp) protein (216aa)
Fibronectin type III domain protein
13_1_20cm_4_scaffold_2348_15
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(12310..12654)
DNA (345bp) protein (115aa)
Ribonuclease HI n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1M4_9CREN
Ribonuclease HI {ECO:0000313|EMBL:EHP70145.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis MK1.;"
ribonuclease H
13_1_20cm_4_scaffold_2348_16
unknown

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12892..13023
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 17 items

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