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13_1_20cm_4_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_379_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3..611)
DNA (609bp) protein (203aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_379_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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783..1025
DNA (243bp) protein (81aa)
PRC-barrel domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1B6B1_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_379_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1025..2401
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E624_9ARCH
hydrolase of the metallo-beta-lactamase superfamily; K07021 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA-metabolising metallo-beta-lactamase
13_1_20cm_4_scaffold_379_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2432..3211)
DNA (780bp) protein (260aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9N1_9EURY
tRNA(1-methyladenosine) methyltransferase-related methyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
protein-l-isoaspartate methyltransferase - like protein
13_1_20cm_4_scaffold_379_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3283..4446
DNA (1164bp) protein (388aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1H0_9FIRM
hydrophobic amino acid ABC transporter permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
amino acid/amide ABC transporter membrane protein 1, haat family
13_1_20cm_4_scaffold_379_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4450..5667
DNA (1218bp) protein (406aa)
High-affinity branched-chain amino acid transport protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X4_9EURY
hydrophobic amino acid ABC transporter permease Tax=RBG_16_Euryarchaeota_68_13_curated
amino acid ABC transporter
13_1_20cm_4_scaffold_379_7

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5677..6312
DNA (636bp) protein (212aa)
Hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRL5_SYNJA
Marine sediment metagenome DNA, contig: S03H2_C01784 {ECO:0000313|EMBL:GAH20727.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hydrophobic amino acid ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_379_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6315..7094
DNA (780bp) protein (260aa)
ABC transporter-like protein (EC:3.6.3.27); K11958 neutral amino acid transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUB4_9BACT
livF; ABC transporter
13_1_20cm_4_scaffold_379_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7120..8547)
DNA (1428bp) protein (476aa)
Hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRL6_SYNJA
neutral amino acid-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hydrophobic amino acid ABC transporter amino acid-binding protein
13_1_20cm_4_scaffold_379_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(8699..8938)
DNA (240bp) protein (80aa)
hypothetical protein; K08982 putative membrane protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_379_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9421..10746
DNA (1326bp) protein (442aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I942_METCZ rbh
13_1_20cm_4_scaffold_379_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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11105..11869
DNA (765bp) protein (255aa)
Site-specific recombinase for integration and excision n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAJ0_9EURY
site-specific recombinase for integration and excision Tax=RBG_16_Euryarchaeota_67_27_curated
Site-specific recombinase for integration and excision
13_1_20cm_4_scaffold_379_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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11854..12339
DNA (486bp) protein (162aa)
Resolvase, N terminal domain protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E615_CARML
site-specific recombinase for integration and excision Tax=RBG_16_Euryarchaeota_67_27_curated
resolvase, N terminal domain protein
13_1_20cm_4_scaffold_379_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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12543..12695
DNA (153bp) protein (51aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_379_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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12829..14199
DNA (1371bp) protein (457aa)
Replication factor C large subunit n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAB9_9EURY rbh
Replication factor C large subunit Tax=RBG_16_Euryarchaeota_67_27_curated
Replication factor C large subunit
13_1_20cm_4_scaffold_379_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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14189..14746
DNA (558bp) protein (186aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_379_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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14772..15710
DNA (939bp) protein (313aa)
Wyosine biosynthesis protein TYW1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM98_ACIS0
wyosine biosynthesis protein TYW1 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
wyosine biosynthesis protein TYW1
13_1_20cm_4_scaffold_379_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15765..16130
DNA (366bp) protein (122aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_379_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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16170..17153
DNA (984bp) protein (328aa)
Small GTP-binding protein domain protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLC8_ACIS0
small GTP-binding protein domain protein Tax=RBG_16_Euryarchaeota_68_13_curated
small GTP-binding protein domain protein
13_1_20cm_4_scaffold_379_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(17107..17988)
DNA (882bp) protein (294aa)
pyridoxine biosynthesis protein; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IB18_ACIB4
pyridoxine biosynthesis protein
13_1_20cm_4_scaffold_379_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

18229..18708
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000373C57C
dephospho-CoA kinase Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_379_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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18701..19384
DNA (684bp) protein (228aa)
putative exosome subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative exosome subunit id=24623545 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
hypothetical protein
13_1_20cm_4_scaffold_379_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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19413..20159
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766403
hypothetical protein; K09123 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_379_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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20156..20947
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368BEB5
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_379_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(20957..25120)
DNA (4164bp) protein (1388aa)
ileS; isoleucyl-tRNA ligase (EC:6.1.1.5) Tax=RBG_16_Euryarchaeota_67_27_curated
ileS; isoleucyl-tRNA ligase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543 rbh
13_1_20cm_4_scaffold_379_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(25257..25886)
DNA (630bp) protein (210aa)
Putative NADH-flavin reductase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQI7_SOLCM
flavin reductase Tax=RBG_16_Acidobacteria_70_10_curated
putative NADH-flavin reductase
13_1_20cm_4_scaffold_379_trna_1
unknown

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comp(25981..26054)
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_379_27

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26197..26742
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL98804.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_4_scaffold_379_28
unknown

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26777..27145
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_4_scaffold_379_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(27158..27418)
DNA (261bp) protein (87aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying items 1-30 of 55 in total

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