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13_1_20cm_4_scaffold_741

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_741_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..513
DNA (513bp) protein (171aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_741_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(503..2269)
DNA (1767bp) protein (589aa)
oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter, ATP-binding component id=4397732 bin=GWC2_Chloroflexi_73_18 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cell wall oligopeptide ABC transporter (ATP binding protein)
13_1_20cm_4_scaffold_741_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2290..3261)
DNA (972bp) protein (324aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_4_scaffold_741_4
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(3290..4240)
DNA (951bp) protein (317aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=24442406 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptide ABC transporter permease
13_1_20cm_4_scaffold_741_5
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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comp(4250..5257)
DNA (1008bp) protein (336aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_62_10_curated
ABC transporter permease; K02033 peptide/nickel transport system permease protein id=24442407 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptide transport system permease
13_1_20cm_4_scaffold_741_6
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(5301..7943)
DNA (2643bp) protein (881aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PKD domain protein id=24442409 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
extracellular solute-binding protein family 5 protein
13_1_20cm_4_scaffold_741_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(8102..9664)
DNA (1563bp) protein (521aa)
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMD5_NITGG
13_1_20cm_4_scaffold_741_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9806..10081)
DNA (276bp) protein (92aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_741_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10165..10470
DNA (306bp) protein (102aa)
dioxygenase, ferredoxin subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dioxygenase, ferredoxin subunit id=14430310 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
dioxygenase, ferredoxin subunit
13_1_20cm_4_scaffold_741_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10492..10818
DNA (327bp) protein (109aa)
ceramide glucosyltransferase (EC:2.4.1.80)
Ceramide glucosyltransferase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0Y0_ISOPI
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 10 items

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