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13_1_20cm_4_scaffold_1022

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1022_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..918
DNA (918bp) protein (306aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035D9A9F
GTPase
13_1_20cm_4_scaffold_1022_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

911..2593
DNA (1683bp) protein (561aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase id=4257366 bin=GWF2_Methylomirabilis_70_14 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_1022_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2628..3074
DNA (447bp) protein (149aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
CBS domain containing protein id=4040235 bin=GWA2_Methylomirabilis_73_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1022_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3074..4474
DNA (1401bp) protein (467aa)
ferredoxin-NADP reductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ferredoxin--NADP(+) reductase id=4040236 bin=GWA2_Methylomirabilis_73_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferredoxin-NADP reductase
13_1_20cm_4_scaffold_1022_5
R_NC10_66_22, NC10, Bacteria

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4557..6755
DNA (2199bp) protein (733aa)
Putative phytochrome sensor protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI93_DESAA
gspE2; general secretion pathway protein E Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
phytochrome sensor protein
13_1_20cm_4_scaffold_1022_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6855..8024)
DNA (1170bp) protein (390aa)
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
major facilitator transporter id=14626825 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin7_NC10_sister organism_group=NC10 rbh
major facilitator transporter
13_1_20cm_4_scaffold_1022_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8058..8348
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3564597 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1022_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8298..8765)
DNA (468bp) protein (156aa)
id=4956250 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Membrane protein, major facilitator superfamily id=3837190 bin=GWC2_Methylomirabilis_70_24 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_1022_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8765..9664)
DNA (900bp) protein (300aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NAD-dependent epimerase/dehydratase id=4956249 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent dehydratase
13_1_20cm_4_scaffold_1022_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9699..12050
DNA (2352bp) protein (784aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized conserved protein UCP016719 id=3564591 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_1022_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12186..13142)
DNA (957bp) protein (319aa)
putative xylanase/chitin deacetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative xylanase/chitin deacetylase id=3837102 bin=GWC2_Methylomirabilis_70_24 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
polysaccharide deacetylase
13_1_20cm_4_scaffold_1022_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13139..14572)
DNA (1434bp) protein (478aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4493806 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_1022_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15510..17186)
DNA (1677bp) protein (559aa)
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit (FdhA2) id=4493797 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 13 items

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