name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_20cm_4_scaffold_1038_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(2..304)
|
etfA2; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer flavoprotein, alpha subunit id=4726976 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
|
|
13_1_20cm_4_scaffold_1038_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(316..1095)
|
fixA; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer flavoprotein, beta subunit id=2475787 bin=GWC2_Methylomirabilis_70_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
electron transfer flavoprotein beta-subunit
|
|
13_1_20cm_4_scaffold_1038_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(1092..1694)
|
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator id=14626080 bin=bin7_NC10_sister species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
|
|
13_1_20cm_4_scaffold_1038_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria
|
Not on your lists |
comp(1857..2927)
|
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) id=14626074 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
|
|
13_1_20cm_4_scaffold_1038_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria
|
Not on your lists |
3035..3295
|
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein id=14425974 bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
GYD family protein
|
|
13_1_20cm_4_scaffold_1038_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(3297..4013)
|
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWC2_Rokubacteria_70_16_curated
ABC-type branched-chain amino acid transport systems, ATPase component id=2972530 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
|
|
13_1_20cm_4_scaffold_1038_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(4010..4735)
|
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein id=14626071 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like)
|
|
13_1_20cm_4_scaffold_1038_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(4732..5748)
|
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport system permease protein LivM id=1703884 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
|
|
13_1_20cm_4_scaffold_1038_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(5845..6654)
|
livH; branched-chain amino acid transport system permease protein; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport system permease protein id=1703885 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
High-affinity branched-chain amino acid transport system permease protein LivH
|
|
13_1_20cm_4_scaffold_1038_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(6722..8008)
|
ABC-type branched-chain amino acid transport systems; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport systems id=2644242 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type branched-chain amino acid transport systems
|
|
13_1_20cm_4_scaffold_1038_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(8084..9091)
|
butyryl-CoA dehydrogenase (EC:1.3.8.1) Tax=GWA2_Rokubacteria_73_35_curated
Butyryl-CoA dehydrogenase id=1703889 bin=GWA2_Methylomirabilis_73_35 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
|
|
13_1_20cm_4_scaffold_1038_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(9103..10278)
|
putative acyl-CoA transferase/carnitine dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
CoA-transferase family III protein id=1703890 bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
putative acyl-CoA transferase/carnitine dehydratase
|
|
13_1_20cm_4_scaffold_1038_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(10275..11546)
|
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase id=1703891 bin=GWA2_Methylomirabilis_73_35 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
|
|
13_1_20cm_4_scaffold_1038_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11569..12294)
|
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B57045
Uncharacterized protein {ECO:0000313|EMBL:AGC43139.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
|
|
13_1_20cm_4_scaffold_1038_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(12307..13062)
|
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) id=1703893 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter ATP-binding protein
|
|
13_1_20cm_4_scaffold_1038_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(13187..13948)
|
monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related id=1703894 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_20cm_4_scaffold_1038_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(13955..15118)
|
putative branched chain amino acid ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4254256 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative branched chain amino acid ABC transporter substrate-binding protein
|
|
13_1_20cm_4_scaffold_1038_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15140..16300)
|
putative branched chain amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4849842 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched chain amino acid ABC transporter substrate-binding protein
|
|
13_1_20cm_4_scaffold_1038_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(16395..17360)
|
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Hypothetical conserved protein id=1703896 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
inner-membrane translocator
|
|
13_1_20cm_4_scaffold_1038_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(17360..18238)
|
livM; branched-chain amino acid ABC transporter system, permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Branched-chain amino acid ABC transporter permease protein id=1703897 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
|
|
13_1_20cm_4_scaffold_1038_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(18235..18591)
|
4-vinyl reductase 4VR Tax=GWA2_Rokubacteria_73_35_curated
4-vinyl reductase 4VR id=1703903 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_20cm_4_scaffold_1038_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(18588..19697)
|
Opine dehydrogenase (EC:1.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NAD-dependent glycerol-3-phosphate dehydrogenase-like protein id=1703904 bin=GWA2_Methylomirabilis_73_35 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD/NADP octopine/nopaline dehydrogenase
|
|
13_1_20cm_4_scaffold_1038_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(19735..20928)
|
Formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase id=1703945 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
|
|
13_1_20cm_4_scaffold_1038_24
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria
|
Not on your lists |
20977..21225
|
SpoVT/AbrB domain-containing protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein id=14629199 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
SpoVT/AbrB domain-containing protein
|
|
13_1_20cm_4_scaffold_1038_25
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria
|
Not on your lists |
21216..21605
|
PilT protein domain-containing protein Tax=CSP1_4_Chloroflexi
PilT protein domain-containing protein id=14629198 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
PilT protein domain-containing protein
|
|
13_1_20cm_4_scaffold_1038_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(21616..23901)
|
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase id=4849835 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
|
13_1_20cm_4_scaffold_1038_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(23909..25504)
|
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] id=14628013 bin=bin7_NC10_sister species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
|
|
13_1_20cm_4_scaffold_1038_28
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(25501..25887)
|
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Cobalamin B12-binding domain protein id=1703951 bin=GWA2_Methylomirabilis_73_35 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MmcF; methylmalonyl-CoA mutase C-terminal domain-containing protein
|
|
13_1_20cm_4_scaffold_1038_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26154..26558)
|
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangi
Phosphodiesterase, MJ0936 family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4Y037_PSEMY
phosphodiesterase
|