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13_1_20cm_4_scaffold_1088

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1088_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3..557
DNA (555bp) protein (185aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4219817 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1088_2
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

582..1373
DNA (792bp) protein (264aa)
Putative short-chain dehydrogenase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCI8_9BRAD
Putative short-chain dehydrogenase {ECO:0000313|EMBL:BAL78475.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
putative short-chain dehydrogenase
13_1_20cm_4_scaffold_1088_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1397..2164
DNA (768bp) protein (256aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4I8_9RHIZ
13_1_20cm_4_scaffold_1088_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2154..2996)
DNA (843bp) protein (281aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10); K01826 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=4221502 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_1088_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3035..3865)
DNA (831bp) protein (277aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein id=14627593 bin=bin7_NC10_sister species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
13_1_20cm_4_scaffold_1088_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

3940..4275
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000368083E
cupin 2 barrel-domain containing protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
cupin
13_1_20cm_4_scaffold_1088_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4584..4976
DNA (393bp) protein (131aa)
Ribonuclease VapC n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QNJ9_9MYCO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_4_scaffold_1088_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4987..5955
DNA (969bp) protein (323aa)
Lactate dehydrogenase-related dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Rokubacteria_70_23_curated
2-hydroxyacid dehydrogenase, putative id=4203221 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
D-isomer specific 2-hydroxyacid dehydrogenase
13_1_20cm_4_scaffold_1088_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5970..6578
DNA (609bp) protein (203aa)
Putative 2,3-dihydroxybiphenyl 1,2-dioxygenase protein n=1 Tax=uncultured bacterium CSL144 RepID=G4WVR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW96301.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_1088_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6842..8197)
DNA (1356bp) protein (452aa)
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein id=14429297 bin=bin3_NC10 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_1088_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8435..9997)
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=E0X6P7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX06590.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_20cm_4_scaffold_1088_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10023..11063)
DNA (1041bp) protein (347aa)
(S)-2-hydroxy-acid oxidase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(S)-2-hydroxy-acid oxidase id=2247864 bin=GWA2_Methylomirabilis_73_35 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
FMN-dependent alpha-hydroxy acid dehydrogenase
13_1_20cm_4_scaffold_1088_13
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11108..11902)
DNA (795bp) protein (265aa)
enoyl-CoA hydratase (EC:4.2.1.-)
Carnitinyl-CoA dehydratase n=2 Tax=Oligotropha carboxidovorans RepID=B6JGC6_OLICO
enoyl-CoA hydratase/isomerase family protein Tax=RBG_16_Gamma2_60_9_curated
13_1_20cm_4_scaffold_1088_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11932..12708)
DNA (777bp) protein (259aa)
sorbitol dehydrogenase (EC:1.1.99.21); K08261 D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5K3_9CHLR
short-chain dehydrogenase
13_1_20cm_4_scaffold_1088_15
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(12719..13174)
DNA (456bp) protein (152aa)
phoD; phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] id=14633068 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin9_gal15 organism_group=GAL15
phosphodiesterase (EC:3.1.3.1)
phosphodiesterase/alkaline phosphatase D Tax=RBG_16_Chloroflexi_57_11_curated
13_1_20cm_4_scaffold_1088_16
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(13171..13533)
DNA (363bp) protein (121aa)
phoD; phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] id=14633068 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin9_gal15 organism_group=GAL15
phosphodiesterase/alkaline phosphatase D Tax=RBG_16_Chloroflexi_57_11_curated
phoD; phosphodiesterase/alkaline phosphatase D
13_1_20cm_4_scaffold_1088_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13556..14665)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036AD608
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
mandelate racemase/muconate lactonizing protein
13_1_20cm_4_scaffold_1088_18
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14697..15809)
DNA (1113bp) protein (371aa)
alcohol dehydrogenase zinc-binding domain-containing protein Tax=RBG_13_Chloroflexi_52_14_curated
Alcohol dehydrogenase zinc-binding domain protein id=4958123 bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_20cm_4_scaffold_1088_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15911..16192
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FD98F0
Uncharacterized protein {ECO:0000313|EMBL:ETW93052.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
hypothetical protein
13_1_20cm_4_scaffold_1088_20
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

16189..16485
DNA (297bp) protein (99aa)
hypothetical protein Tax=GWF2_Lentisphaerae_45_14_curated
13_1_20cm_4_scaffold_1088_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16487..17461
DNA (975bp) protein (325aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWC2_Rokubacteria_70_16_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=4849607 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
Displaying 21 items

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