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13_1_20cm_4_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_111_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

111..815
DNA (705bp) protein (235aa)
putative phosphoglycolate phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Phosphoglycolate phosphatase id=4930053 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_111_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(923..1168)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_4_scaffold_111_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1228..2256
DNA (1029bp) protein (343aa)
2-alkenal reductase (EC:1.3.1.74) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-alkenal reductase (EC:1.3.1.74) id=14627401 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
alcohol dehydrogenase (EC:1.3.1.74)
13_1_20cm_4_scaffold_111_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2265..2435
DNA (171bp) protein (57aa)
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Mandelate racemase/muconate lactonizing protein id=4930050 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_111_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2432..2668
DNA (237bp) protein (79aa)
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Mandelate racemase/muconate lactonizing protein id=4930050 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_111_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2643..3863)
DNA (1221bp) protein (407aa)
multidrug-efflux transporter Tax=GWA2_Rokubacteria_73_35_curated
Multidrug-efflux transporter id=4930049 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multidrug-efflux transporter
13_1_20cm_4_scaffold_111_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3919..5487
DNA (1569bp) protein (523aa)
sulfurtransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sulfurtransferase id=2213482 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Rhodanese-like protein
13_1_20cm_4_scaffold_111_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5484..6452
DNA (969bp) protein (323aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=GWA2_Rokubacteria_73_35_curated
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
Sulfurtransferase id=2213480 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_111_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6449..6895
DNA (447bp) protein (149aa)
Cysteine dioxygenase type I Tax=GWA2_Rokubacteria_73_35_curated
Cysteine dioxygenase type I id=2213479 bin=GWA2_Methylomirabilis_73_35 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine dioxygenase type I
13_1_20cm_4_scaffold_111_10
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

6899..8101
DNA (1203bp) protein (401aa)
cytochrome P450; K00517 [EC:1.14.-.-] Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034D573C
eryF; cytochrome P450 107B1
13_1_20cm_4_scaffold_111_11
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8118..8537
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rhodococcus ruber RepID=UPI0003449F8E
PPOX class F420-dependent enzyme Tax=RBG_16_Gammaproteobacteria_66_13_curated
pyridoxamine 5'-phosphate oxidase
13_1_20cm_4_scaffold_111_12
RLO_PLX_64_10, Bacteria

Not on your lists

8556..8693
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003627A99
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
NHL repeat domain-containing protein
13_1_20cm_4_scaffold_111_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

8721..10043
DNA (1323bp) protein (441aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T0_SPHTD
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACZ39247.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacteri
alkyl hydroperoxide reductase
13_1_20cm_4_scaffold_111_14
Bacillus cytotoxicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10052..11212
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) RepID=A7GTG2_BACCN rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS23420.1}; TaxID=315749 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus subsp. c
hypothetical protein
13_1_20cm_4_scaffold_111_15
Chloroflexi, Bacteria

Not on your lists

comp(11255..11605)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037B5B29
13_1_20cm_4_scaffold_111_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11602..12429)
DNA (828bp) protein (276aa)
ABC-type sugar transport systems, permease component Tax=GWA2_Rokubacteria_73_35_curated
ABC-type sugar transport system, permease component id=1703834 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC-type sugar transport systems, permease component
13_1_20cm_4_scaffold_111_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12426..13277)
DNA (852bp) protein (284aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Binding-protein-dependent transport systems inner membrane component id=1703832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
13_1_20cm_4_scaffold_111_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13313..14653)
DNA (1341bp) protein (447aa)
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Sugar ABC superfamily ATP binding cassette transporter, substrate-binding id=1703830 bin=GWA2_Methylomirabilis_73_35 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 1 extracellular solute-binding protein
13_1_20cm_4_scaffold_111_19
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14740..15819)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036DE1C1
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46459.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
NHL repeat containing protein
13_1_20cm_4_scaffold_111_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15816..16862)
DNA (1047bp) protein (349aa)
Bacterial luciferase-like monooxygenase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PY9_SYMTH
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase-like monooxygenase
13_1_20cm_4_scaffold_111_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16863..18449)
DNA (1587bp) protein (529aa)
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_73_35_curated
AMP-dependent synthetase and ligase id=2213452 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
AMP-dependent synthetase and ligase
13_1_20cm_4_scaffold_111_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18595..19227)
DNA (633bp) protein (211aa)
peroxidase (EC:1.11.1.7) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
peroxidase (EC:1.11.1.7)
Peroxidase id=2312817 bin=GWA2_Methylomirabilis_73_35 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_111_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19250..20218)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E5A747
Uncharacterized protein {ECO:0000313|EMBL:BAH39598.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_111_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20215..21102)
DNA (888bp) protein (296aa)
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75) Tax=GWA2_Rokubacteria_70_23_curated
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase id=4306753 bin=GWF2_Methylomirabilis_70_14 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_111_25
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21093..21650)
DNA (558bp) protein (186aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] id=14627064 bin=bin7_NC10_sister species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
siroheme synthase, N-terminal domain (EC:1.3.1.76 4.99.1.4)
13_1_20cm_4_scaffold_111_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(21617..23299)
DNA (1683bp) protein (561aa)
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP26_KORVE
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:ABF41374.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candid
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein
13_1_20cm_4_scaffold_111_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23433..25337
DNA (1905bp) protein (635aa)
acyl-CoA synthetase/AMP-acid ligase (EC:6.2.1.17) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003631A9F
prpE; propionyl-CoA synthetase
13_1_20cm_4_scaffold_111_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25294..26529)
DNA (1236bp) protein (412aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Major facilitator superfamily MFS_1 id=2312823 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_111_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26662..27798
DNA (1137bp) protein (379aa)
putative hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Amidohydrolase 2 protein id=2312825 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative hydrolase
13_1_20cm_4_scaffold_111_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27841..29160
DNA (1320bp) protein (440aa)
Metal-dependent hydrolase, beta-lactamase superfamily I n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P7N2_CYAGP
beta-lactamase superfamily metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
beta-lactamase superfamily metal-dependent hydrolase
Displaying items 1-30 of 48 in total

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