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13_1_20cm_4_scaffold_147

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_147_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

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1..1221
DNA (1221bp) protein (407aa)
Extracellular solute-binding protein family 1 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ82_STAND
family 1 extracellular solute-binding protein Tax=RBG_16_NC10_65_8_curated
family 1 extracellular solute-binding protein
13_1_20cm_4_scaffold_147_2
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

1287..2141
DNA (855bp) protein (285aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ81_STAND
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=RBG_16_NC10_65_8_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_4_scaffold_147_3
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

2138..2962
DNA (825bp) protein (275aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ80_STAND
binding-protein-dependent transporters inner membrane component Tax=RBG_16_NC10_65_8_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_4_scaffold_147_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3149..3580
DNA (432bp) protein (144aa)
UspA domain-containing protein Tax=CSP1_6_Rokubacteria
UspA domain-containing protein id=14625462 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
UspA domain-containing protein
13_1_20cm_4_scaffold_147_5
Methylocapsa acidiphila, Methylocapsa, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3596..4834)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSV4_CORCM
Fad-dependent monooxygenase {ECO:0000313|EMBL:CAJ01611.1}; TaxID=133552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocapsa.;" source="Methylocapsa acid
hypothetical protein
13_1_20cm_4_scaffold_147_6
unknown

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5066..5230
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_4_scaffold_147_7
unknown

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comp(5251..5442)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_4_scaffold_147_8
unknown

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5646..6080
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_4_scaffold_147_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6055..7713)
DNA (1659bp) protein (553aa)
dipeptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Hemin-binding lipoprotein id=3677748 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_147_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7844..8275)
DNA (432bp) protein (144aa)
UspA domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
UspA domain-containing protein id=3995090 bin=GWA2_Methylomirabilis_73_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_147_11
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8510..10102
DNA (1593bp) protein (531aa)
acetolactate synthase large subunit (EC:2.2.1.6) Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WG09_9CYAN
thiamine pyrophosphate-dependent protein
13_1_20cm_4_scaffold_147_12
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10109..11551
DNA (1443bp) protein (481aa)
Amidase {ECO:0000313|EMBL:AEB11001.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEB11001.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marin
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNI6_MARHT rbh
13_1_20cm_4_scaffold_147_13
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

11613..12323
DNA (711bp) protein (237aa)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C {ECO:0000313|EMBL:CCW35737.1}; EC=1.3.3.11 {ECO:0000313|EMBL:CCW35737.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonad
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C (EC:1.3.3.11)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZE9_9BACT
13_1_20cm_4_scaffold_147_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12347..12937)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCQ8_NITMU
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_4_scaffold_147_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13081..13461
DNA (381bp) protein (127aa)
id=4485920 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3068362 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_147_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13416..14303
DNA (888bp) protein (296aa)
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_73_35_curated
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
pseudouridine synthase
13_1_20cm_4_scaffold_147_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14319..15257
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI000368870D
cyclase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative cyclase
13_1_20cm_4_scaffold_147_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15268..16161
DNA (894bp) protein (298aa)
Dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
Dehydrogenase (Modular protein) id=3428787 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
oxidoreductase
13_1_20cm_4_scaffold_147_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16162..17295)
DNA (1134bp) protein (378aa)
Putative amidohydrolase 2 protein n=2 Tax=Ralstonia solanacearum RepID=B5SFS4_RALSL
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
putative hydrolase
13_1_20cm_4_scaffold_147_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(17292..19583)
DNA (2292bp) protein (764aa)
carbon monoxide dehydrogenase Tax=CSP1_6_Rokubacteria
carbon monoxide dehydrogenase id=14628099 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
13_1_20cm_4_scaffold_147_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19583..20368)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003770DDF
cyclase Tax=GWA2_Rokubacteria_73_35_curated
cyclase
13_1_20cm_4_scaffold_147_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20526..21206)
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627686 bin=bin7_NC10_sister species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying 22 items

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