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13_1_20cm_4_scaffold_160

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_160_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3..1460
DNA (1458bp) protein (486aa)
cobalamin B12-binding/Radical SAM family protein Tax=CSP1_6_Rokubacteria
cobalamin B12-binding/Radical SAM family protein id=14627517 bin=bin7_NC10_sister species=Leptospirillum ferriphilum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
cobalamin B12-binding/Radical SAM family
13_1_20cm_4_scaffold_160_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1479..2162)
DNA (684bp) protein (228aa)
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10)
Putative Orotate phosphoribosyltransferase (OPRT) (OPRTase) id=3366422 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
13_1_20cm_4_scaffold_160_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2211..2885
DNA (675bp) protein (225aa)
peptidase M22, glycoprotease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase M22, glycoprotease id=14627521 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
peptidase M22, glycoprotease
13_1_20cm_4_scaffold_160_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2866..3360
DNA (495bp) protein (165aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rimI; ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] id=14627522 bin=bin7_NC10_sister species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
13_1_20cm_4_scaffold_160_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3421..4236
DNA (816bp) protein (272aa)
id=3877323 Tax=GWA2_Rokubacteria_70_23_curated
id=3877323 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_160_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4412..4870
DNA (459bp) protein (153aa)
id=3366415 Tax=GWA2_Rokubacteria_70_23_curated
id=3366415 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_160_7
unknown

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comp(4879..5250)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_160_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5323..6318
DNA (996bp) protein (332aa)
Lysine/arginine/ornithine transport system kinase (EC:2.7.-.-); K07588 LAO/AO transport system kinase [EC:2.7.-.-] id=14627523 bin=bin7_NC10_sister species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_160_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6315..8300
DNA (1986bp) protein (662aa)
Iron-sulfur cluster-binding protein n=1 Tax=Sutterella sp. CAG:521 RepID=R7KNM3_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_160_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8300..8650
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4957133 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_160_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8656..9825
DNA (1170bp) protein (390aa)
Putative Histidine kinase {ECO:0000313|EMBL:CBE69170.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBE69170.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Can
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHD8_9BACT
13_1_20cm_4_scaffold_160_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10207..11778
DNA (1572bp) protein (524aa)
putative histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidine kinase id=4849342 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
histidine kinase
13_1_20cm_4_scaffold_160_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12069..12692
DNA (624bp) protein (208aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=2224572 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_160_14
unknown

Not on your lists

12694..12786
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_20cm_4_scaffold_160_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12880..13941
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00037F521A
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_160_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14044..14442
DNA (399bp) protein (133aa)
multi-sensor hybrid histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
Histidine kinase id=4058803 bin=GWC2_Methylomirabilis_70_24 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
13_1_20cm_4_scaffold_160_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14491..14607)
DNA (117bp) protein (39aa)
Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_4_scaffold_160_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14659..14856)
DNA (198bp) protein (66aa)
id=14430174 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_160_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14856..15695)
DNA (840bp) protein (280aa)
sorbitol dehydrogenase (EC:1.1.1.14) Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=4911922 bin=GWC2_Methylomirabilis_70_16 species=Chlorella variabilis genus=Chlorella taxon_order=Chlorellales taxon_class=Trebouxiophyceae phylum=Chlorophyta tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase
13_1_20cm_4_scaffold_160_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15807..16259)
DNA (453bp) protein (151aa)
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
13_1_20cm_4_scaffold_160_21
unknown

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16266..16445
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_4_scaffold_160_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16438..17841
DNA (1404bp) protein (468aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWC2_Rokubacteria_70_16_curated
Amidase id=3014927 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
13_1_20cm_4_scaffold_160_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17858..18658
DNA (801bp) protein (267aa)
abortive infection protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Abortive infection protein id=1890947 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abortive infection protein
13_1_20cm_4_scaffold_160_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18749..18913
DNA (165bp) protein (55aa)
sir2 family protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] id=1241516 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
13_1_20cm_4_scaffold_160_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18910..19116
DNA (207bp) protein (69aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80) Tax=GWA2_Rokubacteria_73_35_curated
4-oxalocrotonate decarboxylase id=1890939 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 25 items

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