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13_1_20cm_4_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_193_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QC92_CATAD
ABC transporter related {ECO:0000313|EMBL:ACU74540.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
ABC transporter
13_1_20cm_4_scaffold_193_2
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317..1051)
DNA (735bp) protein (245aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C903_SPHTD
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KCB41699.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
ABC transporter
13_1_20cm_4_scaffold_193_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1054..2103)
DNA (1050bp) protein (350aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Inner-membrane translocator id=4771378 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
13_1_20cm_4_scaffold_193_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2090..2962)
DNA (873bp) protein (291aa)
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein id=14625559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
13_1_20cm_4_scaffold_193_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2972..4294)
DNA (1323bp) protein (441aa)
braC; Leu/Ile/Val-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Probable Leu/Ile/Val-binding protein id=3775401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braC; Leu/Ile/Val-binding protein
13_1_20cm_4_scaffold_193_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4383..5537
DNA (1155bp) protein (385aa)
Alanine racemase {ECO:0000313|EMBL:AKF03326.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus a
Alanine racemase id=4667228 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
alanine racemase
13_1_20cm_4_scaffold_193_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5574..5993)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Putative uncharacterized protein id=3847106 bin=GWC2_Methylomirabilis_70_16 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_193_8
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5990..6256)
DNA (267bp) protein (89aa)
id=3847105 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
id=3847105 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_193_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6309..7130)
DNA (822bp) protein (274aa)
sugar ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport system inner membrane component id=4015915 bin=GWF2_Methylomirabilis_70_14 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative sugar ABC transporter, permease protein
13_1_20cm_4_scaffold_193_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7131..8024)
DNA (894bp) protein (298aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Binding-protein-dependent transport system inner membrane component id=4138947 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
13_1_20cm_4_scaffold_193_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8047..9348)
DNA (1302bp) protein (434aa)
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
Extracellular solute-binding protein family 1 id=4172264 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_193_12
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9373..10266)
DNA (894bp) protein (298aa)
phytanoyl-CoA dioxygenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B396DA
phytanoyl-CoA dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
htxA; alpha-ketoglutarate-dependent hypophosphite dioxygenase
13_1_20cm_4_scaffold_193_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10403..12373
DNA (1971bp) protein (657aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_73_35_curated
Dehydrogenase E1 component id=3013129 bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dehydrogenase, E1 component
13_1_20cm_4_scaffold_193_14
unknown

Not on your lists

comp(12482..12619)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_4_scaffold_193_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12705..13082)
DNA (378bp) protein (126aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glyoxalase/bleomycin resistance protein/dioxygenase id=14626134 bin=bin7_NC10_sister species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lactoylglutathione lyase
13_1_20cm_4_scaffold_193_16
unknown

Not on your lists

13219..13407
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_4_scaffold_193_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13412..16009)
DNA (2598bp) protein (866aa)
Lytic transglycosylase Tax=GWA2_Rokubacteria_73_35_curated
Lytic transglycosylase id=4793525 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
lytic transglycosylase domain-containing protein
13_1_20cm_4_scaffold_193_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16012..17709)
DNA (1698bp) protein (566aa)
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=14625966 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
13_1_20cm_4_scaffold_193_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17717..18643
DNA (927bp) protein (309aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_4_scaffold_193_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18640..19713
DNA (1074bp) protein (358aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidinol-phosphate aminotransferase id=4429857 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidinol-phosphate aminotransferase
13_1_20cm_4_scaffold_193_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20059..20580
DNA (522bp) protein (174aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4429854 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_193_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20577..21632
DNA (1056bp) protein (352aa)
id=4698146 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4698146 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_193_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21803..22777
DNA (975bp) protein (325aa)
peptidase S58, DmpA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-aminopeptidase/D-esterase id=4429850 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S58, DmpA
13_1_20cm_4_scaffold_193_24
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22774..24330
DNA (1557bp) protein (519aa)
Patatin n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7G3_NITWC
patatin Tax=RBG_16_Deltaproteobacteria_54_11_curated
patatin
13_1_20cm_4_scaffold_193_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24344..25087)
DNA (744bp) protein (248aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative intramembrane serine protease id=2322384 bin=GWA2_Methylomirabilis_73_35 species=Bacillus halodurans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
intramembrane serine protease
13_1_20cm_4_scaffold_193_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25084..25947)
DNA (864bp) protein (288aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
hypothetical protein id=4029904 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_193_27
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26030..27268)
DNA (1239bp) protein (413aa)
cytochrome P450; K00517 [EC:1.14.-.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
cytochrome P450 n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034CFF9E
cytochrome P450 family protein
13_1_20cm_4_scaffold_193_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27265..28563)
DNA (1299bp) protein (433aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homogentisate 1,2-dioxygenase id=4840543 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
homogentisate 1,2-dioxygenase
13_1_20cm_4_scaffold_193_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28695..28982
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4029901 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_193_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(28990..29910)
DNA (921bp) protein (307aa)
Peptidase Tax=GWA2_Rokubacteria_73_35_curated
Peptidase id=4029897 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Displaying items 1-30 of 38 in total

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