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13_1_20cm_4_scaffold_1973

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1973_1
unknown

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210..539
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_4_scaffold_1973_trna_1
unknown

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comp(854..927)
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_1973_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(959..1699)
DNA (741bp) protein (247aa)
non-canonical purine NTP pyrophosphatase (EC:3.1.4.1) Tax=GWA2_Rokubacteria_73_35_curated
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase id=4994650 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1973_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1674..2405)
DNA (732bp) protein (244aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rph; ribonuclease Rph (EC:2.7.7.56)
Ribonuclease PH id=4994649 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_1973_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2411..3859)
DNA (1449bp) protein (483aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) id=14625267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
13_1_20cm_4_scaffold_1973_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3912..4505)
DNA (594bp) protein (198aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4870480 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_1973_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4800..6371)
DNA (1572bp) protein (524aa)
copper resistance protein CopC; K07245 putative copper resistance protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
copper resistance D domain-containing protein; K07245 putative copper resistance protein D id=14626780 bin=bin7_NC10_sister species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
copper resistance protein D family
13_1_20cm_4_scaffold_1973_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(6378..7499)
DNA (1122bp) protein (374aa)
membrane protein Tax=CSP1_6_Rokubacteria
membrane protein id=14625637 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
membrane protein
13_1_20cm_4_scaffold_1973_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7538..8566)
DNA (1029bp) protein (343aa)
Oxidoreductase domain protein Tax=GWA2_Rokubacteria_70_23_curated
Putative Oxidoreductase domain protein id=4870514 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
Oxidoreductase domain protein
13_1_20cm_4_scaffold_1973_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8568..9896)
DNA (1329bp) protein (443aa)
aminotransferase (EC:2.6.1.-) Tax=GWA2_Rokubacteria_70_23_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase id=4396514 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_1973_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10158..11000)
DNA (843bp) protein (281aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4870512 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_1973_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11021..11728)
DNA (708bp) protein (236aa)
Nucleotidyl transferase Tax=GWA2_Rokubacteria_70_23_curated
Putative Nucleotidyl transferase id=4870511 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Nucleotidyl transferase
13_1_20cm_4_scaffold_1973_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11769..12005)
DNA (237bp) protein (79aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=GWA2_Rokubacteria_70_23_curated
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4396484 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD-superfamily hydrolase, subfamily IA, variant 3
Displaying 13 items

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