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13_1_20cm_4_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_277_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)
putative oxidoreductase Tax=RBG_16_Chloroflexi_68_14_curated
oxidoreductase id=14626050 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
oxidoreductase
13_1_20cm_4_scaffold_277_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(396..1685)
DNA (1290bp) protein (430aa)
RNA polymerase sigma factor Tax=GWA2_Rokubacteria_73_35_curated
Putative RNA polymerase sigma factor id=4219874 bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_277_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1748..2095)
DNA (348bp) protein (116aa)
YCII-like protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein CJLT1_11578 id=4219818 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
YCII-like protein
13_1_20cm_4_scaffold_277_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2210..3238
DNA (1029bp) protein (343aa)
Trap dicarboxylate transporter-dctp subunit n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBQ4_9RHOB
extracellular solute-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
extracellular solute-binding protein
13_1_20cm_4_scaffold_277_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3235..3708
DNA (474bp) protein (158aa)
Tripartite ATP-independent periplasmic n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBQ3_9RHOB
dctQ; TRAP dicarboxylate transporter subunit DctQ Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_1_20cm_4_scaffold_277_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3705..5003
DNA (1299bp) protein (433aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F6A34C rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_1_20cm_4_scaffold_277_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5009..6469)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D0723
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_4_scaffold_277_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6483..6905)
DNA (423bp) protein (141aa)
Ala-tRNA(Pro) hydrolase (EC:3.1.1.-) Tax=GWA2_Rokubacteria_73_35_curated
Ala-tRNA(Pro) hydrolase id=2319310 bin=GWA2_Methylomirabilis_73_35 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alanyl-tRNA synthetase domain-containing protein
13_1_20cm_4_scaffold_277_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7072..8007)
DNA (936bp) protein (312aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase, zinc-binding domain protein id=2319311 bin=GWA2_Methylomirabilis_73_35 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_1_20cm_4_scaffold_277_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8021..9202)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETX04670.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
luciferase
13_1_20cm_4_scaffold_277_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9212..10390)
DNA (1179bp) protein (393aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=GWA2_Rokubacteria_70_23_curated
CinA-like protein id=4532703 bin=GWF2_Methylomirabilis_70_14 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cinA; CinA-like competence-damaged protein
13_1_20cm_4_scaffold_277_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10429..11598
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003718233
Uncharacterized protein {ECO:0000313|EMBL:ETX09304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acyl-CoA dehydrogenase
13_1_20cm_4_scaffold_277_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11644..12723
DNA (1080bp) protein (360aa)
amidohydrolase 2 Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Amidohydrolase 2 id=3780588 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
13_1_20cm_4_scaffold_277_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12720..14477)
DNA (1758bp) protein (586aa)
putative luciferase-like monooxygenase Tax=GWA2_Rokubacteria_70_23_curated
Putative luciferase-like monooxygenase id=4532705 bin=GWF2_Methylomirabilis_70_14 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
aldo/keto reductase
13_1_20cm_4_scaffold_277_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14649..15506
DNA (858bp) protein (286aa)
lipase (EC:3.1.1.3)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1CRS3_EMIHU
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
13_1_20cm_4_scaffold_277_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15503..16858
DNA (1356bp) protein (452aa)
coxL2; carbon-monoxide dehydrogenase large subunit (EC:1.2.99.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
coxL2; carbon-monoxide dehydrogenase large subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase large subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KNL3_RHISN
13_1_20cm_4_scaffold_277_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16828..17721
DNA (894bp) protein (298aa)
coxL2; carbon-monoxide dehydrogenase large subunit (EC:1.2.99.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JH35_9RHIZ
Carbon monoxide dehydrogenase, large subunit
13_1_20cm_4_scaffold_277_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17730..18152)
DNA (423bp) protein (141aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Ribonuclease VapC11 id=4424732 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PilT protein domain-containing protein
13_1_20cm_4_scaffold_277_19
unknown

Not on your lists

comp(18152..18388)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_4_scaffold_277_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18509..19510
DNA (1002bp) protein (334aa)
Lytic transglycosylase, catalytic Tax=GWC2_Rokubacteria_70_16_curated
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lytic murein transglycosylase
13_1_20cm_4_scaffold_277_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19544..20977
DNA (1434bp) protein (478aa)
putative two-component histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine kinase id=1767179 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
two-component sensor histidine kinase
13_1_20cm_4_scaffold_277_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21098..22384)
DNA (1287bp) protein (429aa)
major facilitator superfamily permease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Major facilitator superfamily protein id=4761798 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
putative permease of the major facilitator superfamily
13_1_20cm_4_scaffold_277_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22733..23599
DNA (867bp) protein (289aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B17_SOLUE
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_277_24
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24000..24311
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0X6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES51495.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;
13_1_20cm_4_scaffold_277_25
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24314..25348
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APN6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ39222.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way
hypothetical protein
13_1_20cm_4_scaffold_277_26
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

25338..26165
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APN5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ39221.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way
hypothetical protein
13_1_20cm_4_scaffold_277_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

26268..28841
DNA (2574bp) protein (858aa)
response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative Histidine kinase id=2877061 bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
two-component system sensor protein
13_1_20cm_4_scaffold_277_28
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28869..30140)
DNA (1272bp) protein (424aa)
Osmosensitive K+ channel histidine kinase KdpD n=1 Tax=Rhodovulum sp. PH10 RepID=J5PUY1_9RHOB
two component sensor histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
two component sensor histidine kinase
13_1_20cm_4_scaffold_277_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30140..30778)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC41D
winged helix family two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
two component transcriptional regulator
13_1_20cm_4_scaffold_277_30
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30836..31381)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDI3_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
Displaying items 1-30 of 40 in total

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