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13_1_20cm_4_scaffold_3526

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3526_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1..867)
DNA (867bp) protein (289aa)
ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=CSP1_6_Rokubacteria
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=14625228 bin=bin7_NC10_sister species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_1_20cm_4_scaffold_3526_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(867..1871)
DNA (1005bp) protein (335aa)
dipeptide/oligopeptide/nickel ABC transporter permease Tax=CSP1_6_Rokubacteria
dipeptide/oligopeptide/nickel ABC transporter permease id=14625229 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein
13_1_20cm_4_scaffold_3526_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1900..3501)
DNA (1602bp) protein (534aa)
oligopeptide/dipeptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
oligopeptide/dipeptide ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=14625230 bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
oligopeptide/dipeptide ABC transporter peptide-binding protein
13_1_20cm_4_scaffold_3526_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3787..4953
DNA (1167bp) protein (389aa)
beta-lactamase Tax=GWC2_Rokubacteria_70_16_curated
Beta-lactamase id=3879294 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase
13_1_20cm_4_scaffold_3526_5
unknown

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4971..5165
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_4_scaffold_3526_6
unknown

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comp(5213..5548)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_4_scaffold_3526_7
unknown

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comp(5657..6385)
DNA (729bp) protein (243aa)

This feature has no annotations

13_1_20cm_4_scaffold_3526_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6609..7562
DNA (954bp) protein (318aa)
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidoglycan-associated lipoprotein id=2546000 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
OmpA/MotB domain protein
13_1_20cm_4_scaffold_3526_9
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7598..8497)
DNA (900bp) protein (300aa)
hypothetical protein id=14429739 bin=bin3_NC10 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
alpha/beta hydrolase
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_20cm_4_scaffold_3526_10
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8874..9995)
DNA (1122bp) protein (374aa)
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Gamma2_60_9_curated
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE2DC
methionine synthase
13_1_20cm_4_scaffold_3526_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10019..10156)
DNA (138bp) protein (46aa)
short-chain dehydrogenase (EC:1.1.1.-)
Cyclopentanol dehydrogenase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0R6X9_MYCS2
Uncharacterized protein {ECO:0000313|EMBL:ETW98721.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Displaying 11 items

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