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13_1_20cm_4_scaffold_497

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_497_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..915
DNA (915bp) protein (305aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Extracellular ligand-binding receptor id=4973968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative branched-chain amino acid ABC transporter substrate binding protein
13_1_20cm_4_scaffold_497_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1077..2048
DNA (972bp) protein (324aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Inner-membrane translocator id=4973970 bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease
13_1_20cm_4_scaffold_497_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2045..3247
DNA (1203bp) protein (401aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Inner-membrane translocator id=4973971 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_20cm_4_scaffold_497_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3248..4039
DNA (792bp) protein (264aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=4973972 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC transporter-like protein
13_1_20cm_4_scaffold_497_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4032..4733
DNA (702bp) protein (234aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related protein id=4973973 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_20cm_4_scaffold_497_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4718..6382)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60114.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_20cm_4_scaffold_497_7
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6379..7860)
DNA (1482bp) protein (494aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
Glycosyl transferase family 2 id=2907808 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glycosyl transferase family protein
13_1_20cm_4_scaffold_497_8
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7857..9113)
DNA (1257bp) protein (419aa)
NDP-hexose 3-C-methyltransferase TylCIII Tax=RBG_16_Deltaproteobacteria_58_17_curated
NDP-hexose 3-C-methyltransferase TylCIII id=4091136 bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria rbh
C-methyltransferase
13_1_20cm_4_scaffold_497_9
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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9401..10999
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4N6_DESTA
hypothetical protein Tax=RBG_13_OP3X_46_9_curated
hypothetical protein
13_1_20cm_4_scaffold_497_10
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

10996..12612
DNA (1617bp) protein (539aa)
Glycosyl transferase, family 39 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPL0_9BACT
hypothetical protein Tax=RBG_13_OP3X_46_9_curated
hypothetical protein
13_1_20cm_4_scaffold_497_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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12679..13851
DNA (1173bp) protein (391aa)
FAD dependent oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
FAD dependent oxidoreductase id=4614152 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_497_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14025..15596
DNA (1572bp) protein (524aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=4814777 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_497_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15593..16561
DNA (969bp) protein (323aa)
glycosyltransferase Tax=GWC2_Rokubacteria_70_16_curated
Glycosyl transferase id=4814773 bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
undecaprenyl-phosphate glycosyltransferase, DPM1-like family
13_1_20cm_4_scaffold_497_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16567..18456
DNA (1890bp) protein (630aa)
asparagine synthase Tax=GWC2_Rokubacteria_70_16_curated
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase
13_1_20cm_4_scaffold_497_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18453..19448
DNA (996bp) protein (332aa)
putative methyl transferase Tax=GWA2_Rokubacteria_70_23_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=4814775 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative methyl transferase
13_1_20cm_4_scaffold_497_16
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19448..20179
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Putative uncharacterized protein id=4927186 bin=GWA2_Ignavibacteria_55_11 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
methylase
13_1_20cm_4_scaffold_497_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20189..22405
DNA (2217bp) protein (739aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4771369 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_497_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22566..23873
DNA (1308bp) protein (436aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14625563 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
Displaying 18 items

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